Information for 24-AGGTGCCTCCTACTGT (Motif 34)

T G C A C T A G A C T G C A G T A T C G T G A C A G T C C G A T A T G C G T A C A G C T C G T A A G T C G A C T A C T G A G C T
Reverse Opposite:
C T G A A G T C C G T A C T A G A C G T C T G A A C T G A T C G C G T A A C T G A C T G A T G C G T C A T G A C G A T C A C G T
p-value:1e-8
log p-value:-2.009e+01
Information Content per bp:1.701
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.6 +/- 16.9bp
Average Position of motif in Background45.5 +/- 11.2bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:1
Score:0.65
Offset:3
Orientation:forward strand
Alignment:AGGTGCCTCCTACTGT--
---GGCCYCCTGCTGDGH
 T G C A C T A G A C T G C A G T A T C G T G A C A G T C C G A T A T G C G T A C A G C T C G T A A G T C G A C T A C T G A G C T A C G T A C G T
A C G T A C G T A C G T C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:AGGTGCCTCCTACTGT-
-----CCCCCTGCTGTG
 T G C A C T A G A C T G C A G T A T C G T G A C A G T C C G A T A T G C G T A C A G C T C G T A A G T C G A C T A C T G A G C T A C G T
A C G T A C G T A C G T A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

PB0205.1_Zic1_2/Jaspar

Match Rank:3
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:AGGTGCCTCCTACTGT----
-----TNTCCTGCTGTGNNG
 T G C A C T A G A C T G C A G T A T C G T G A C A G T C C G A T A T G C G T A C A G C T C G T A A G T C G A C T A C T G A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---AGGTGCCTCCTACTGT-
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T T G C A C T A G A C T G C A G T A T C G T G A C A G T C C G A T A T G C G T A C A G C T C G T A A G T C G A C T A C T G A G C T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

PB0207.1_Zic3_2/Jaspar

Match Rank:5
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:AGGTGCCTCCTACTGT----
-----NNTCCTGCTGTGNNN
 T G C A C T A G A C T G C A G T A T C G T G A C A G T C C G A T A T G C G T A C A G C T C G T A A G T C G A C T A C T G A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

CTCF/MA0139.1/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AGGTGCCTCCTACTGT---
TAGCGCCCCCTGGTGGCCA
 T G C A C T A G A C T G C A G T A T C G T G A C A G T C C G A T A T G C G T A C A G C T C G T A A G T C G A C T A C T G A G C T A C G T A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

ZIC4/MA0751.1/Jaspar

Match Rank:7
Score:0.58
Offset:3
Orientation:forward strand
Alignment:AGGTGCCTCCTACTGT--
---GACCCCCCGCTGTGC
 T G C A C T A G A C T G C A G T A T C G T G A C A G T C C G A T A T G C G T A C A G C T C G T A A G T C G A C T A C T G A G C T A C G T A C G T
A C G T A C G T A C G T A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C

PB0206.1_Zic2_2/Jaspar

Match Rank:8
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:AGGTGCCTCCTACTGT----
-----TCNCCTGCTGNGNNN
 T G C A C T A G A C T G C A G T A T C G T G A C A G T C C G A T A T G C G T A C A G C T C G T A A G T C G A C T A C T G A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:9
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AGGTGCCTCCTACTGT---
ANAGTGCCACCTGGTGGCCA
 A C G T T G C A C T A G A C T G C A G T A T C G T G A C A G T C C G A T A T G C G T A C A G C T C G T A A G T C G A C T A C T G A G C T A C G T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

PB0203.1_Zfp691_2/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AGGTGCCTCCTACTGT
TACGAGACTCCTCTAAC
 A C G T T G C A C T A G A C T G C A G T A T C G T G A C A G T C C G A T A T G C G T A C A G C T C G T A A G T C G A C T A C T G A G C T
C A G T C T G A A T G C A C T G C G T A C A T G C T G A A T G C A C G T A G T C T G A C A G C T G A T C C G A T T G C A G T C A T A G C