Information for 16-AGCCTATTGT (Motif 31)

C G T A A C T G A T G C A G T C A G C T C T G A A C G T A C G T A C T G A C G T
Reverse Opposite:
G T C A A G T C C G T A C G T A G A C T C T G A A C T G A T C G A G T C A C G T
p-value:1e-9
log p-value:-2.122e+01
Information Content per bp:1.881
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.18%
Number of Background Sequences with motif26.4
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets59.2 +/- 23.3bp
Average Position of motif in Background50.0 +/- 28.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX9/MA0077.1/Jaspar

Match Rank:1
Score:0.76
Offset:3
Orientation:forward strand
Alignment:AGCCTATTGT--
---CCATTGTTC
 C G T A A C T G A T G C A G T C A G C T C T G A A C G T A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A G T C G A T C G C T A C A G T C G A T T A C G C G A T G C A T G A T C

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.75
Offset:2
Orientation:forward strand
Alignment:AGCCTATTGT--
--NCCATTGTTC
 C G T A A C T G A T G C A G T C A G C T C T G A A C G T A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:3
Score:0.74
Offset:3
Orientation:forward strand
Alignment:AGCCTATTGT-
---CCWTTGTY
 C G T A A C T G A T G C A G T C A G C T C T G A A C G T A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:4
Score:0.74
Offset:3
Orientation:forward strand
Alignment:AGCCTATTGT---
---CCATTGTTYB
 C G T A A C T G A T G C A G T C A G C T C T G A A C G T A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:5
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:AGCCTATTGT--
--NCCATTGTTY
 C G T A A C T G A T G C A G T C A G C T C T G A A C G T A C G T A C T G A C G T A C G T A C G T
A C G T A C G T C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:6
Score:0.73
Offset:3
Orientation:forward strand
Alignment:AGCCTATTGT---
---CCATTGTTNY
 C G T A A C T G A T G C A G T C A G C T C T G A A C G T A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T

PB0183.1_Sry_2/Jaspar

Match Rank:7
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:AGCCTATTGT-------
CNNNTATTGTTCNNNNN
 C G T A A C T G A T G C A G T C A G C T C T G A A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A T G C C T G A A G T C A G T C G A C T C G T A A C G T A G C T T C A G G C A T A C G T A G T C G T A C C A T G G C A T C T A G C T G A

PB0132.1_Hbp1_2/Jaspar

Match Rank:8
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--AGCCTATTGT-----
TGTTCCCATTGTGTACT
 A C G T A C G T C G T A A C T G A T G C A G T C A G C T C T G A A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C T A G C A G T A G C T A G T C G A T C G A T C C G T A G A C T C G A T C A T G C A G T T C A G G A C T C T G A A T G C G C A T

Sox17/MA0078.1/Jaspar

Match Rank:9
Score:0.71
Offset:2
Orientation:forward strand
Alignment:AGCCTATTGT-
--CTCATTGTC
 C G T A A C T G A T G C A G T C A G C T C T G A A C G T A C G T A C T G A C G T A C G T
A C G T A C G T G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C

PB0173.1_Sox21_2/Jaspar

Match Rank:10
Score:0.71
Offset:0
Orientation:forward strand
Alignment:AGCCTATTGT-------
AATCAATTGTTCCGCTA
 C G T A A C T G A T G C A G T C A G C T C T G A A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T G A C T C A G A G C T A T G C G C T A C G T A A G C T C G A T A T C G C G A T A G C T A T G C T G A C A C T G G A T C C A G T T C G A