Information for 10-ATGGGATTARGKGAGG (Motif 13)

C G T A C G A T C T A G A C T G A C T G C T G A A C G T A C G T C G T A C T A G A T C G A C T G C T A G G C T A A C T G A T C G
Reverse Opposite:
T A G C T G A C C G A T A G T C T G A C A T G C A G T C G A C T C G T A C G T A A G C T G T A C G T A C A G T C G C T A C G A T
p-value:1e-13
log p-value:-3.053e+01
Information Content per bp:1.731
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.18%
Number of Background Sequences with motif9.1
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets40.4 +/- 20.4bp
Average Position of motif in Background49.0 +/- 36.0bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PITX3/MA0714.1/Jaspar

Match Rank:1
Score:0.77
Offset:2
Orientation:reverse strand
Alignment:ATGGGATTARGKGAGG
--GGGATTANN-----
 C G T A C G A T C T A G A C T G A C T G C T G A A C G T A C G T C G T A C T A G A T C G A C T G C T A G G C T A A C T G A T C G
A C G T A C G T C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G A C G T A C G T A C G T A C G T A C G T

GSC/MA0648.1/Jaspar

Match Rank:2
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:ATGGGATTARGKGAGG
-NNGGATTAGN-----
 C G T A C G A T C T A G A C T G A C T G C T G A A C G T A C G T C G T A C T A G A T C G A C T G C T A G G C T A A C T G A T C G
A C G T C T A G T A C G T C A G T C A G T G C A A C G T G A C T C T G A C T A G A T G C A C G T A C G T A C G T A C G T A C G T

Pitx1/MA0682.1/Jaspar

Match Rank:3
Score:0.75
Offset:2
Orientation:reverse strand
Alignment:ATGGGATTARGKGAGG
--GGGATTAA------
 C G T A C G A T C T A G A C T G A C T G C T G A A C G T A C G T C G T A C T A G A T C G A C T G C T A G G C T A A C T G A T C G
A C G T A C G T C A T G C T A G C T A G G T C A C G A T A G C T C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T

GSC2/MA0891.1/Jaspar

Match Rank:4
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:ATGGGATTARGKGAGG
-GNGGATTAGN-----
 C G T A C G A T C T A G A C T G A C T G C T G A A C G T A C G T C G T A C T A G A T C G A C T G C T A G G C T A A C T G A T C G
A C G T C T A G T A G C T C A G C A T G T G C A C G A T C G A T C G T A C T A G A C T G A C G T A C G T A C G T A C G T A C G T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:5
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:ATGGGATTARGKGAGG
-VRGGATTARN-----
 C G T A C G A T C T A G A C T G A C T G C T G A A C G T A C G T C G T A C T A G A T C G A C T G C T A G G C T A A C T G A T C G
A C G T T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C A C G T A C G T A C G T A C G T A C G T

Dmbx1/MA0883.1/Jaspar

Match Rank:6
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---ATGGGATTARGKGAGG
TGAACCGGATTAATGAA--
 A C G T A C G T A C G T C G T A C G A T C T A G A C T G A C T G C T G A A C G T A C G T C G T A C T A G A T C G A C T G C T A G G C T A A C T G A T C G
G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A A C G T A C G T

PH0025.1_Dmbx1/Jaspar

Match Rank:7
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---ATGGGATTARGKGAGG
TGAACCGGATTAATGAA--
 A C G T A C G T A C G T C G T A C G A T C T A G A C T G A C T G C T G A A C G T A C G T C G T A C T A G A T C G A C T G C T A G G C T A A C T G A T C G
G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A A C G T A C G T

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:8
Score:0.73
Offset:2
Orientation:forward strand
Alignment:ATGGGATTARGKGAGG
--RGGATTAR------
 C G T A C G A T C T A G A C T G A C T G C T G A A C G T A C G T C G T A C T A G A T C G A C T G C T A G G C T A A C T G A T C G
A C G T A C G T T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T

Crx/MA0467.1/Jaspar

Match Rank:9
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-ATGGGATTARGKGAGG
AAGAGGATTAG------
 A C G T C G T A C G A T C T A G A C T G A C T G C T G A A C G T A C G T C G T A C T A G A T C G A C T G C T A G G C T A A C T G A T C G
T C G A C T G A C T A G T C G A C T A G A C T G G T C A A C G T A G C T C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:10
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:ATGGGATTARGKGAGG
-NGGGATTA-------
 C G T A C G A T C T A G A C T G A C T G C T G A A C G T A C G T C G T A C T A G A T C G A C T G C T A G G C T A A C T G A T C G
A C G T T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T