Information for 6-CCACACCACAACT (Motif 5)

A G T C G T A C G T C A A G T C C G T A A G T C A G T C G T C A A G T C C T G A C G T A A G T C A C G T
Reverse Opposite:
C G T A A C T G A C G T A G C T A C T G A C G T A C T G A C T G A C G T A C T G A C G T A C T G A C T G
p-value:1e-11
log p-value:-2.646e+01
Information Content per bp:1.913
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets42.0 +/- 25.3bp
Average Position of motif in Background31.5 +/- 15.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:1
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CCACACCACAACT
-NWAACCACADNN
A G T C G T A C G T C A A G T C C G T A A G T C A G T C G T C A A G T C C T G A C G T A A G T C A C G T
A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:CCACACCACAACT
--AAACCACAGC-
A G T C G T A C G T C A A G T C C G T A A G T C A G T C G T C A A G T C C T G A C G T A A G T C A C G T
A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:3
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CCACACCACAACT
--AAACCACANN-
A G T C G T A C G T C A A G T C C G T A A G T C A G T C G T C A A G T C C T G A C G T A A G T C A C G T
A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CCACACCACAACT
-NAAACCACAG--
A G T C G T A C G T C A A G T C C G T A A G T C A G T C G T C A A G T C C T G A C G T A A G T C A C G T
A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:5
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CCACACCACAACT
--AAACCGCAAA-
A G T C G T A C G T C A A G T C C G T A A G T C A G T C G T C A A G T C C T G A C G T A A G T C A C G T
A C G T A C G T G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:6
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CCACACCACAACT
--AAACCGCAA--
A G T C G T A C G T C A A G T C C G T A A G T C A G T C G T C A A G T C C T G A C G T A A G T C A C G T
A C G T A C G T G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A A C G T A C G T

Klf1/MA0493.1/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CCACACCACAACT
GGCCACACCCA----
A C G T A C G T A G T C G T A C G T C A A G T C C G T A A G T C A G T C G T C A A G T C C T G A C G T A A G T C A C G T
C T A G T C A G T G A C G A T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C G T A C G T A C G T A C G T

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:8
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CCACACCACAACT
GGCCACACCCAN---
A C G T A C G T A G T C G T A C G T C A A G T C C G T A A G T C A G T C G T C A A G T C C T G A C G T A A G T C A C G T
C T A G C T A G T G A C A G T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C T G A C G T A C G T A C G T

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CCACACCACAACT
GCCACACCCA----
A C G T A G T C G T A C G T C A A G T C C G T A A G T C A G T C G T C A A G T C C T G A C G T A A G T C A C G T
C T A G G T A C A G T C T G C A A G T C C T G A A G T C A G T C A G T C G C T A A C G T A C G T A C G T A C G T

PB0122.1_Foxk1_2/Jaspar

Match Rank:10
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CCACACCACAACT---
-CAAACAACAACACCT
A G T C G T A C G T C A A G T C C G T A A G T C A G T C G T C A A G T C C T G A C G T A A G T C A C G T A C G T A C G T A C G T
A C G T G T A C G C T A G T C A C T G A G A T C T G C A T C G A A G T C T C G A C G T A G A T C C G T A G A T C G T A C G A C T