Information for 4-TCGGACTCAGCCGGTG (Motif 11)

A G C T A G T C A T C G A T C G C G T A G T A C C A G T A G T C C G T A A C T G A G T C A G T C A C T G A T C G A G C T A C T G
Reverse Opposite:
A G T C C T G A A T G C A G T C A C T G A C T G A G T C A C G T A C T G G C T A A C T G C G A T A T G C A T G C A C T G C T G A
p-value:1e-8
log p-value:-1.919e+01
Information Content per bp:1.835
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.46%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.5 +/- 18.6bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:1
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:TCGGACTCAGCCGGTG---
----DCHCAGCAGGRGGCC
 A G C T A G T C A T C G A T C G C G T A G T A C C A G T A G T C C G T A A C T G A G T C A G T C A C T G A T C G A G C T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.62
Offset:5
Orientation:forward strand
Alignment:TCGGACTCAGCCGGTG-
-----CACAGCAGGGGG
 A G C T A G T C A T C G A T C G C G T A G T A C C A G T A G T C C G T A A C T G A G T C A G T C A C T G A T C G A G C T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:3
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:TCGGACTCAGCCGGTG
----DCTCAGCAGG--
 A G C T A G T C A T C G A T C G C G T A G T A C C A G T A G T C C G T A A C T G A G T C A G T C A C T G A T C G A G C T A C T G
A C G T A C G T A C G T A C G T C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:4
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TCGGACTCAGCCGGTG-
--CCACACAGCAGGAGA
 A G C T A G T C A T C G A T C G C G T A G T A C C A G T A G T C C G T A A C T G A G T C A G T C A C T G A T C G A G C T A C T G A C G T
A C G T A C G T G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0205.1_Zic1_2/Jaspar

Match Rank:5
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TCGGACTCAGCCGGTG-
--CCACACAGCAGGAGA
 A G C T A G T C A T C G A T C G C G T A G T A C C A G T A G T C C G T A A C T G A G T C A G T C A C T G A T C G A G C T A C T G A C G T
A C G T A C G T A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.60
Offset:6
Orientation:forward strand
Alignment:TCGGACTCAGCCGGTG
------NCAGCTGCTG
 A G C T A G T C A T C G A T C G C G T A G T A C C A G T A G T C C G T A A C T G A G T C A G T C A C T G A T C G A G C T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G

PB0207.1_Zic3_2/Jaspar

Match Rank:7
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TCGGACTCAGCCGGTG-
--GAGCACAGCAGGACA
 A G C T A G T C A T C G A T C G C G T A G T A C C A G T A G T C C G T A A C T G A G T C A G T C A C T G A T C G A G C T A C T G A C G T
A C G T A C G T C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

ZIC1/MA0696.1/Jaspar

Match Rank:8
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:TCGGACTCAGCCGGTG---
-----CACAGCGGGGGGTC
 A G C T A G T C A T C G A T C G C G T A G T A C C A G T A G T C C G T A A C T G A G T C A G T C A C T G A T C G A G C T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G A C C T G A A G T C T G C A T C A G A G T C C T A G C A T G T C A G C A T G C A T G C A T G A G C T T G A C

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:9
Score:0.57
Offset:5
Orientation:forward strand
Alignment:TCGGACTCAGCCGGTG-
-----AGCAGCTGCTNN
 A G C T A G T C A T C G A T C G C G T A G T A C C A G T A G T C C G T A A C T G A G T C A G T C A C T G A T C G A G C T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C

ZIC3/MA0697.1/Jaspar

Match Rank:10
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:TCGGACTCAGCCGGTG---
----NCGCAGCGGGGGGTC
 A G C T A G T C A T C G A T C G C G T A G T A C C A G T A G T C C G T A A C T G A G T C A G T C A C T G A T C G A G C T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G G T A C C T A G G A T C T G C A T C A G A G T C C T A G A C T G A C T G C A T G C A T G C A T G A G C T T G A C