Information for 2-RSYCACGTGRYCY (Motif 2)

T C A G T A C G A G T C A G T C C G T A A G T C C T A G A C G T A C T G T C G A A G T C A G T C A G T C
Reverse Opposite:
T C A G T C A G T C A G A G C T A G T C C G T A A G T C C T A G A C G T A C T G T C A G A T G C A G T C
p-value:1e-51
log p-value:-1.189e+02
Information Content per bp:1.648
Number of Target Sequences with motif76.0
Percentage of Target Sequences with motif9.04%
Number of Background Sequences with motif390.2
Percentage of Background Sequences with motif0.82%
Average Position of motif in Targets51.0 +/- 18.4bp
Average Position of motif in Background47.4 +/- 31.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.97
Offset:2
Orientation:reverse strand
Alignment:RSYCACGTGRYCY
--TCACGTGACC-
T C A G T A C G A G T C A G T C C G T A A G T C C T A G A C G T A C T G T C G A A G T C A G T C A G T C
A C G T A C G T A G C T A G T C G T C A A G T C C T A G A C G T A T C G T C G A A G T C A T G C A C G T

CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer

Match Rank:2
Score:0.95
Offset:3
Orientation:reverse strand
Alignment:RSYCACGTGRYCY
---CACGTGDC--
T C A G T A C G A G T C A G T C C G T A A G T C C T A G A C G T A C T G T C G A A G T C A G T C A G T C
A C G T A C G T A C G T G A T C C T G A A G T C C T A G G C A T C T A G C G T A G A T C A C G T A C G T

BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer

Match Rank:3
Score:0.95
Offset:3
Orientation:reverse strand
Alignment:RSYCACGTGRYCY
---CACGTGNC--
T C A G T A C G A G T C A G T C C G T A A G T C C T A G A C G T A C T G T C G A A G T C A G T C A G T C
A C G T A C G T A C G T G T A C C T G A A G T C C T A G G C A T A C T G G T C A G A T C A C G T A C G T

Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.94
Offset:1
Orientation:forward strand
Alignment:RSYCACGTGRYCY
-ACCACGTGGTNN
T C A G T A C G A G T C A G T C C G T A A G T C C T A G A C G T A C T G T C G A A G T C A G T C A G T C
A C G T T C G A T G A C A G T C C G T A A G T C C T A G A C G T A C T G A C T G A G C T A G T C G C A T

TFE3/MA0831.1/Jaspar

Match Rank:5
Score:0.94
Offset:1
Orientation:forward strand
Alignment:RSYCACGTGRYCY
-ATCACGTGAC--
T C A G T A C G A G T C A G T C C G T A A G T C C T A G A C G T A C T G T C G A A G T C A G T C A G T C
A C G T T C G A A G C T A T G C G C T A A G T C T C A G G C A T A C T G T G C A G A T C A C G T A C G T

n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.94
Offset:2
Orientation:reverse strand
Alignment:RSYCACGTGRYCY
--CCACGTGGNN-
T C A G T A C G A G T C A G T C C G T A A G T C C T A G A C G T A C T G T C G A A G T C A G T C A G T C
A C G T A C G T T A G C A G T C C G T A A G T C C T A G G C A T A C T G A T C G A G C T A T G C A C G T

TFEB/MA0692.1/Jaspar

Match Rank:7
Score:0.94
Offset:1
Orientation:forward strand
Alignment:RSYCACGTGRYCY
-ATCACGTGAC--
T C A G T A C G A G T C A G T C C G T A A G T C C T A G A C G T A C T G T C G A A G T C A G T C A G T C
A C G T T C G A A G C T G T A C G T C A A G T C T C A G G C A T A C T G T G C A A G T C A C G T A C G T

Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer

Match Rank:8
Score:0.93
Offset:1
Orientation:reverse strand
Alignment:RSYCACGTGRYCY
-ACCACGTGAC--
T C A G T A C G A G T C A G T C C G T A A G T C C T A G A C G T A C T G T C G A A G T C A G T C A G T C
A C G T T C G A G A T C A G T C C G T A A G T C T C A G A G C T A C T G T G C A A G T C A C G T A C G T

c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.93
Offset:3
Orientation:reverse strand
Alignment:RSYCACGTGRYCY
---CACGTGGN--
T C A G T A C G A G T C A G T C C G T A A G T C C T A G A C G T A C T G T C G A A G T C A G T C A G T C
A C G T A C G T A C G T G T A C C T G A A G T C C T A G G A C T A C T G A T C G A G C T A C G T A C G T

c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.93
Offset:2
Orientation:reverse strand
Alignment:RSYCACGTGRYCY
--CCACGTGGNN-
T C A G T A C G A G T C A G T C C G T A A G T C C T A G A C G T A C T G T C G A A G T C A G T C A G T C
A C G T A C G T T A G C A G T C C G T A A G T C C T A G A G C T A C T G A T C G A G T C A G T C A C G T