Information for 7-GCAGGGTCTAGGCTTC (Motif 15)

A C T G A G T C C G T A A C T G A C T G C T A G A C G T A G T C C G A T C G T A A C T G A C T G A G T C A C G T A C G T A G T C
Reverse Opposite:
A C T G C G T A C G T A A C T G A G T C A G T C A C G T C G T A A C T G G T C A A G T C A G T C A G T C C G A T A C T G A G T C
p-value:1e-8
log p-value:-1.932e+01
Information Content per bp:1.910
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.48%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.2 +/- 10.9bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.57
Offset:11
Orientation:forward strand
Alignment:GCAGGGTCTAGGCTTC-
-----------GCTTCC
 A C T G A G T C C G T A A C T G A C T G C T A G A C G T A G T C C G A T C G T A A C T G A C T G A G T C A C G T A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GCAGGGTCTAGGCTTC
BCNGGTTCTAGANCN-
 A C T G A G T C C G T A A C T G A C T G C T A G A C G T A G T C C G A T C G T A A C T G A C T G A G T C A C G T A C G T A G T C
A G C T T G A C C T A G C A T G C T A G G A C T A C G T A G T C A G C T C T G A T A C G T C G A C G A T A G T C G A C T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.55
Offset:7
Orientation:reverse strand
Alignment:GCAGGGTCTAGGCTTC
-------CNAGGCCT-
 A C T G A G T C C G T A A C T G A C T G C T A G A C G T A G T C C G A T C G T A A C T G A C T G A G T C A C G T A C G T A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:4
Score:0.53
Offset:7
Orientation:reverse strand
Alignment:GCAGGGTCTAGGCTTC
-------CTAGGCCT-
 A C T G A G T C C G T A A C T G A C T G C T A G A C G T A G T C C G A T C G T A A C T G A C T G A G T C A C G T A C G T A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T

PB0157.1_Rara_2/Jaspar

Match Rank:5
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---GCAGGGTCTAGGCTTC
AGAGCGGGGTCAAGTA---
 A C G T A C G T A C G T A C T G A G T C C G T A A C T G A C T G C T A G A C G T A G T C C G A T C G T A A C T G A C T G A G T C A C G T A C G T A G T C
G T C A C A T G G T C A C A T G A G T C A T C G T A C G A C T G C A T G C G A T A G T C C T G A G T C A A C T G A C G T G T C A A C G T A C G T A C G T

PB0200.1_Zfp187_2/Jaspar

Match Rank:6
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GCAGGGTCTAGGCTTC
NNAGGGACAAGGGCNC
 A C T G A G T C C G T A A C T G A C T G C T A G A C G T A G T C C G A T C G T A A C T G A C T G A G T C A C G T A C G T A G T C
A G C T C G A T C T G A C A T G C T A G C T A G C G T A A G T C T C G A C T G A C T A G C T A G C A T G A G T C G A C T G T A C

Zfx/MA0146.2/Jaspar

Match Rank:7
Score:0.51
Offset:2
Orientation:forward strand
Alignment:GCAGGGTCTAGGCTTC
--GGGGCCGAGGCCTG
 A C T G A G T C C G T A A C T G A C T G C T A G A C G T A G T C C G A T C G T A A C T G A C T G A G T C A C G T A C G T A G T C
A C G T A C G T A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G

Nr2e3/MA0164.1/Jaspar

Match Rank:8
Score:0.50
Offset:8
Orientation:forward strand
Alignment:GCAGGGTCTAGGCTTC
--------CAAGCTT-
 A C T G A G T C C G T A A C T G A C T G C T A G A C G T A G T C C G A T C G T A A C T G A C T G A G T C A C G T A C G T A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:9
Score:0.48
Offset:3
Orientation:forward strand
Alignment:GCAGGGTCTAGGCTTC
---AGGTCAAGGTCA-
 A C T G A G T C C G T A A C T G A C T G C T A G A C G T A G T C C G A T C G T A A C T G A C T G A G T C A C G T A C G T A G T C
A C G T A C G T A C G T T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:10
Score:0.48
Offset:3
Orientation:forward strand
Alignment:GCAGGGTCTAGGCTTC
---AGGTCAAGGTCA-
 A C T G A G T C C G T A A C T G A C T G C T A G A C G T A G T C C G A T C G T A A C T G A C T G A G T C A C G T A C G T A G T C
A C G T A C G T A C G T C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A A C G T