Information for 10-CGGACAGCTT (Motif 18)

A G T C T A C G A T C G C G T A A G T C C T G A C T A G A G T C C G A T A C G T
Reverse Opposite:
T G C A C G T A A C T G A G T C A G C T A C T G A C G T A T G C A T G C T C A G
p-value:1e-9
log p-value:-2.237e+01
Information Content per bp:1.843
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.46%
Number of Background Sequences with motif52.7
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets42.3 +/- 23.1bp
Average Position of motif in Background56.1 +/- 26.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:1
Score:0.70
Offset:2
Orientation:forward strand
Alignment:CGGACAGCTT
--AACAGCTG
 A G T C T A C G A T C G C G T A A G T C C T G A C T A G A G T C C G A T A C G T
A C G T A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G

Tcf12/MA0521.1/Jaspar

Match Rank:2
Score:0.70
Offset:2
Orientation:forward strand
Alignment:CGGACAGCTT---
--AACAGCTGCAG
 A G T C T A C G A T C G C G T A A G T C C T G A C T A G A G T C C G A T A C G T A C G T A C G T A C G T
A C G T A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G

Myog/MA0500.1/Jaspar

Match Rank:3
Score:0.69
Offset:2
Orientation:forward strand
Alignment:CGGACAGCTT---
--GACAGCTGCAG
 A G T C T A C G A T C G C G T A A G T C C T G A C T A G A G T C C G A T A C G T A C G T A C G T A C G T
A C G T A C G T T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G

Myod1/MA0499.1/Jaspar

Match Rank:4
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CGGACAGCTT--
NGNGACAGCTGCN
 A C G T A G T C T A C G A T C G C G T A A G T C C T G A C T A G A G T C C G A T A C G T A C G T A C G T
T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:5
Score:0.67
Offset:1
Orientation:forward strand
Alignment:CGGACAGCTT-
-BAACAGCTGT
 A G T C T A C G A T C G C G T A A G T C C T G A C T A G A G T C C G A T A C G T A C G T
A C G T A C G T T C G A T C G A A G T C G T C A T A C G A T G C A C G T A C T G A G C T

PH0169.1_Tgif1/Jaspar

Match Rank:6
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----CGGACAGCTT---
GATATTGACAGCTGCGT
 A C G T A C G T A C G T A C G T A G T C T A C G A T C G C G T A A G T C C T G A C T A G A G T C C G A T A C G T A C G T A C G T A C G T
C A G T C T G A A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C T A G A T G C A C G T T A C G T A G C A C T G C G A T

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:CGGACAGCTT
--CACAGN--
 A G T C T A C G A T C G C G T A A G T C C T G A C T A G A G T C C G A T A C G T
A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T

PH0170.1_Tgif2/Jaspar

Match Rank:8
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CGGACAGCTT---
GTATTGACAGCTNNTT
 A C G T A C G T A C G T A G T C T A C G A T C G C G T A A G T C C T G A C T A G A G T C C G A T A C G T A C G T A C G T A C G T
A C T G A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C A T G T A G C G A C T T C G A T A C G G C A T C G A T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:9
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:CGGACAGCTT---
---HCAGCTGDTN
 A G T C T A C G A T C G C G T A A G T C C T G A C T A G A G T C C G A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T C A A G T C C G T A A C T G G T A C G C A T C T A G C G A T A C G T C A G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:10
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CGGACAGCTT-
-NAACAGCTGG
 A G T C T A C G A T C G C G T A A G T C C T G A C T A G A G T C C G A T A C G T A C G T
A C G T C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G