Information for 7-TAAGAGGCCG (Motif 11)

A G C T T G C A C G T A C T A G G C T A T A C G A T C G T A G C A T G C T A C G
Reverse Opposite:
A T G C T A C G A T C G A T G C A T G C C A G T A G T C G C A T A C G T C T G A
p-value:1e-11
log p-value:-2.617e+01
Information Content per bp:1.679
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif3.28%
Number of Background Sequences with motif295.4
Percentage of Background Sequences with motif0.61%
Average Position of motif in Targets47.2 +/- 27.1bp
Average Position of motif in Background50.1 +/- 27.6bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NKX3-2/MA0122.2/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TAAGAGGCCG
TTAAGTGGN--
 A C G T A G C T T G C A C G T A C T A G G C T A T A C G A T C G T A G C A T G C T A C G
G A C T C G A T C T G A T C G A C A T G C G A T C T A G A T C G A G C T A C G T A C G T

Nkx3-1/MA0124.2/Jaspar

Match Rank:2
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TAAGAGGCCG
TTAAGTGGT--
 A C G T A G C T T G C A C G T A C T A G G C T A T A C G A T C G T A G C A T G C T A C G
G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:3
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TAAGAGGCCG
TTGAGTGSTT-
 A C G T A G C T T G C A C G T A C T A G G C T A T A C G A T C G T A G C A T G C T A C G
G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:4
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----TAAGAGGCCG--
NTNNTTAAGTGGNTNAN
 A C G T A C G T A C G T A C G T A C G T A G C T T G C A C G T A C T A G G C T A T A C G A T C G T A G C A T G C T A C G A C G T A C G T
T C G A A G C T A G T C A T G C G C A T C G A T C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G T A C A T G

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.61
Offset:3
Orientation:forward strand
Alignment:TAAGAGGCCG---
---GAGSCCGAGC
 A G C T T G C A C G T A C T A G G C T A T A C G A T C G T A G C A T G C T A C G A C G T A C G T A C G T
A C G T A C G T A C G T A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C

Zfx/MA0146.2/Jaspar

Match Rank:6
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:TAAGAGGCCG-------
---CAGGCCNNGGCCNN
 A G C T T G C A C G T A C T A G G C T A T A C G A T C G T A G C A T G C T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

TATA-Box(TBP)/Promoter/Homer

Match Rank:7
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----TAAGAGGCCG
GNCTATAAAAGG---
 A C G T A C G T A C G T A C G T A C G T A G C T T G C A C G T A C T A G G C T A T A C G A T C G T A G C A T G C T A C G
A T C G A T C G A T G C A G C T G C T A A C G T C G T A C G T A C T G A C T G A C T A G T A C G A C G T A C G T A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:8
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TAAGAGGCCG
CTYRAGTGSY--
 A C G T A C G T A G C T T G C A C G T A C T A G G C T A T A C G A T C G T A G C A T G C T A C G
A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:9
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TAAGAGGCCG
BTBRAGTGSN--
 A C G T A C G T A G C T T G C A C G T A C T A G G C T A T A C G A T C G T A G C A T G C T A C G
A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.58
Offset:4
Orientation:forward strand
Alignment:TAAGAGGCCG--
----AGGCCTNG
 A G C T T G C A C G T A C T A G G C T A T A C G A T C G T A G C A T G C T A C G A C G T A C G T
A C G T A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G