Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer | 1e-28 | -6.583e+01 | 0.0000 | 32.0 | 3.70% | 96.7 | 0.20% | motif file (matrix) |
svg |
2 |
| Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer | 1e-16 | -3.886e+01 | 0.0000 | 111.0 | 12.83% | 2495.7 | 5.27% | motif file (matrix) |
svg |
3 |
| Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer | 1e-15 | -3.653e+01 | 0.0000 | 75.0 | 8.67% | 1371.3 | 2.89% | motif file (matrix) |
svg |
4 |
| Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer | 1e-15 | -3.482e+01 | 0.0000 | 68.0 | 7.86% | 1201.5 | 2.54% | motif file (matrix) |
svg |
5 |
| Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer | 1e-15 | -3.467e+01 | 0.0000 | 107.0 | 12.37% | 2508.8 | 5.29% | motif file (matrix) |
svg |
6 |
| Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer | 1e-14 | -3.321e+01 | 0.0000 | 103.0 | 11.91% | 2420.4 | 5.11% | motif file (matrix) |
svg |
7 |
| Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer | 1e-12 | -2.963e+01 | 0.0000 | 90.0 | 10.40% | 2092.8 | 4.42% | motif file (matrix) |
svg |
8 |
| Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer | 1e-12 | -2.915e+01 | 0.0000 | 34.0 | 3.93% | 390.8 | 0.82% | motif file (matrix) |
svg |
9 |
| Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer | 1e-12 | -2.915e+01 | 0.0000 | 54.0 | 6.24% | 922.7 | 1.95% | motif file (matrix) |
svg |
10 |
| Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer | 1e-11 | -2.709e+01 | 0.0000 | 27.0 | 3.12% | 263.6 | 0.56% | motif file (matrix) |
svg |
11 |
| Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer | 1e-10 | -2.324e+01 | 0.0000 | 30.0 | 3.47% | 385.9 | 0.81% | motif file (matrix) |
svg |
12 |
| Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-9 | -2.216e+01 | 0.0000 | 76.0 | 8.79% | 1886.8 | 3.98% | motif file (matrix) |
svg |
13 |
| Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer | 1e-8 | -2.072e+01 | 0.0000 | 142.0 | 16.42% | 4643.7 | 9.80% | motif file (matrix) |
svg |
14 |
| Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer | 1e-8 | -1.954e+01 | 0.0000 | 92.0 | 10.64% | 2629.6 | 5.55% | motif file (matrix) |
svg |
15 |
| Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer | 1e-8 | -1.870e+01 | 0.0000 | 20.0 | 2.31% | 217.4 | 0.46% | motif file (matrix) |
svg |
16 |
| Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer | 1e-7 | -1.748e+01 | 0.0000 | 56.0 | 6.47% | 1354.7 | 2.86% | motif file (matrix) |
svg |
17 |
| GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer | 1e-7 | -1.668e+01 | 0.0000 | 88.0 | 10.17% | 2633.0 | 5.56% | motif file (matrix) |
svg |
18 |
| KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer | 1e-6 | -1.550e+01 | 0.0000 | 198.0 | 22.89% | 7662.4 | 16.17% | motif file (matrix) |
svg |
19 |
| ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer | 1e-6 | -1.542e+01 | 0.0000 | 70.0 | 8.09% | 1982.6 | 4.18% | motif file (matrix) |
svg |
20 |
| Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer | 1e-6 | -1.411e+01 | 0.0000 | 51.0 | 5.90% | 1317.6 | 2.78% | motif file (matrix) |
svg |
21 |
| Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer | 1e-5 | -1.356e+01 | 0.0000 | 73.0 | 8.44% | 2212.4 | 4.67% | motif file (matrix) |
svg |
22 |
| EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer | 1e-5 | -1.353e+01 | 0.0000 | 55.0 | 6.36% | 1498.0 | 3.16% | motif file (matrix) |
svg |
23 |
| Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer | 1e-5 | -1.335e+01 | 0.0000 | 106.0 | 12.25% | 3633.7 | 7.67% | motif file (matrix) |
svg |
24 |
| Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer | 1e-5 | -1.334e+01 | 0.0000 | 31.0 | 3.58% | 640.5 | 1.35% | motif file (matrix) |
svg |
25 |
| ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer | 1e-5 | -1.237e+01 | 0.0001 | 86.0 | 9.94% | 2840.2 | 5.99% | motif file (matrix) |
svg |
26 |
| ETS(ETS)/Promoter/Homer | 1e-5 | -1.236e+01 | 0.0001 | 45.0 | 5.20% | 1174.3 | 2.48% | motif file (matrix) |
svg |
27 |
| KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer | 1e-5 | -1.194e+01 | 0.0001 | 140.0 | 16.18% | 5307.6 | 11.20% | motif file (matrix) |
svg |
28 |
| ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer | 1e-5 | -1.168e+01 | 0.0001 | 115.0 | 13.29% | 4183.0 | 8.83% | motif file (matrix) |
svg |
29 |
| ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer | 1e-4 | -1.139e+01 | 0.0001 | 108.0 | 12.49% | 3893.7 | 8.22% | motif file (matrix) |
svg |
30 |
| Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer | 1e-4 | -1.116e+01 | 0.0002 | 112.0 | 12.95% | 4096.4 | 8.64% | motif file (matrix) |
svg |
31 |
| YY1(Zf)/Promoter/Homer | 1e-4 | -1.095e+01 | 0.0002 | 17.0 | 1.97% | 273.6 | 0.58% | motif file (matrix) |
svg |
32 |
| Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer | 1e-4 | -1.013e+01 | 0.0005 | 69.0 | 7.98% | 2280.5 | 4.81% | motif file (matrix) |
svg |
33 |
| Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer | 1e-4 | -9.778e+00 | 0.0006 | 47.0 | 5.43% | 1388.4 | 2.93% | motif file (matrix) |
svg |
34 |
| Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967) | 1e-4 | -9.361e+00 | 0.0009 | 69.0 | 7.98% | 2340.7 | 4.94% | motif file (matrix) |
svg |
35 |
| Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-3 | -9.165e+00 | 0.0011 | 182.0 | 21.04% | 7669.0 | 16.18% | motif file (matrix) |
svg |
36 |
| Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer | 1e-3 | -9.095e+00 | 0.0011 | 74.0 | 8.55% | 2581.9 | 5.45% | motif file (matrix) |
svg |
37 |
| ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer | 1e-3 | -8.834e+00 | 0.0014 | 85.0 | 9.83% | 3096.2 | 6.53% | motif file (matrix) |
svg |
38 |
| Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer | 1e-3 | -8.528e+00 | 0.0019 | 108.0 | 12.49% | 4187.2 | 8.84% | motif file (matrix) |
svg |
39 |
| OCT:OCT(POU,Homeobox,IR1)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer | 1e-3 | -8.512e+00 | 0.0019 | 3.0 | 0.35% | 6.7 | 0.01% | motif file (matrix) |
svg |
40 |
| EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer | 1e-3 | -8.306e+00 | 0.0022 | 79.0 | 9.13% | 2876.8 | 6.07% | motif file (matrix) |
svg |
41 |
| Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer | 1e-3 | -7.940e+00 | 0.0032 | 28.0 | 3.24% | 744.4 | 1.57% | motif file (matrix) |
svg |
42 |
| Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer | 1e-3 | -7.437e+00 | 0.0051 | 146.0 | 16.88% | 6153.3 | 12.98% | motif file (matrix) |
svg |
43 |
| FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-3 | -7.080e+00 | 0.0071 | 32.0 | 3.70% | 946.6 | 2.00% | motif file (matrix) |
svg |
44 |
| Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer | 1e-3 | -7.049e+00 | 0.0072 | 55.0 | 6.36% | 1921.4 | 4.05% | motif file (matrix) |
svg |
45 |
| PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer | 1e-3 | -7.000e+00 | 0.0074 | 9.0 | 1.04% | 133.5 | 0.28% | motif file (matrix) |
svg |
46 |
| E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer | 1e-3 | -6.964e+00 | 0.0075 | 134.0 | 15.49% | 5636.3 | 11.89% | motif file (matrix) |
svg |
47 |
| ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer | 1e-2 | -6.875e+00 | 0.0080 | 30.0 | 3.47% | 878.7 | 1.85% | motif file (matrix) |
svg |
48 |
| BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer | 1e-2 | -6.850e+00 | 0.0080 | 26.0 | 3.01% | 722.8 | 1.53% | motif file (matrix) |
svg |
49 |
| Sp1(Zf)/Promoter/Homer | 1e-2 | -6.680e+00 | 0.0093 | 44.0 | 5.09% | 1473.8 | 3.11% | motif file (matrix) |
svg |
50 |
| FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer | 1e-2 | -6.609e+00 | 0.0098 | 27.0 | 3.12% | 774.5 | 1.63% | motif file (matrix) |
svg |
51 |
| Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer | 1e-2 | -6.519e+00 | 0.0105 | 12.0 | 1.39% | 233.4 | 0.49% | motif file (matrix) |
svg |
52 |
| Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer | 1e-2 | -6.515e+00 | 0.0105 | 74.0 | 8.55% | 2832.5 | 5.98% | motif file (matrix) |
svg |
53 |
| Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer | 1e-2 | -6.346e+00 | 0.0120 | 23.0 | 2.66% | 632.4 | 1.33% | motif file (matrix) |
svg |
54 |
| FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer | 1e-2 | -6.323e+00 | 0.0121 | 25.0 | 2.89% | 711.4 | 1.50% | motif file (matrix) |
svg |
55 |
| Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer | 1e-2 | -6.281e+00 | 0.0124 | 131.0 | 15.14% | 5593.8 | 11.80% | motif file (matrix) |
svg |
56 |
| KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer | 1e-2 | -6.088e+00 | 0.0148 | 105.0 | 12.14% | 4354.7 | 9.19% | motif file (matrix) |
svg |
57 |
| Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer | 1e-2 | -6.084e+00 | 0.0148 | 13.0 | 1.50% | 280.0 | 0.59% | motif file (matrix) |
svg |
58 |
| MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer | 1e-2 | -6.039e+00 | 0.0150 | 17.0 | 1.97% | 421.6 | 0.89% | motif file (matrix) |
svg |
59 |
| CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-2 | -6.027e+00 | 0.0150 | 14.0 | 1.62% | 316.0 | 0.67% | motif file (matrix) |
svg |
60 |
| E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer | 1e-2 | -6.003e+00 | 0.0150 | 66.0 | 7.63% | 2519.8 | 5.32% | motif file (matrix) |
svg |
61 |
| SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer | 1e-2 | -5.992e+00 | 0.0150 | 318.0 | 36.76% | 15260.7 | 32.20% | motif file (matrix) |
svg |
62 |
| Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer | 1e-2 | -5.931e+00 | 0.0156 | 21.0 | 2.43% | 576.0 | 1.22% | motif file (matrix) |
svg |
63 |
| Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer | 1e-2 | -5.678e+00 | 0.0198 | 5.0 | 0.58% | 54.9 | 0.12% | motif file (matrix) |
svg |
64 |
| KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer | 1e-2 | -5.417e+00 | 0.0252 | 50.0 | 5.78% | 1849.9 | 3.90% | motif file (matrix) |
svg |
65 |
| Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer | 1e-2 | -5.361e+00 | 0.0263 | 198.0 | 22.89% | 9138.2 | 19.28% | motif file (matrix) |
svg |
66 |
| Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer | 1e-2 | -5.343e+00 | 0.0264 | 53.0 | 6.13% | 1993.4 | 4.21% | motif file (matrix) |
svg |
67 |
| Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer | 1e-2 | -5.315e+00 | 0.0267 | 31.0 | 3.58% | 1021.2 | 2.15% | motif file (matrix) |
svg |
68 |
| SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer | 1e-2 | -5.053e+00 | 0.0342 | 62.0 | 7.17% | 2442.4 | 5.15% | motif file (matrix) |
svg |
69 |
| HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer | 1e-2 | -5.010e+00 | 0.0352 | 157.0 | 18.15% | 7118.3 | 15.02% | motif file (matrix) |
svg |
70 |
| Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer | 1e-2 | -4.925e+00 | 0.0378 | 19.0 | 2.20% | 551.3 | 1.16% | motif file (matrix) |
svg |
71 |
| ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer | 1e-2 | -4.897e+00 | 0.0383 | 43.0 | 4.97% | 1584.1 | 3.34% | motif file (matrix) |
svg |
72 |
| Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer | 1e-2 | -4.891e+00 | 0.0383 | 34.0 | 3.93% | 1184.2 | 2.50% | motif file (matrix) |
svg |
73 |
| E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-2 | -4.845e+00 | 0.0392 | 110.0 | 12.72% | 4792.7 | 10.11% | motif file (matrix) |
svg |
74 |
| NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer | 1e-2 | -4.651e+00 | 0.0470 | 6.0 | 0.69% | 97.5 | 0.21% | motif file (matrix) |
svg |
75 |
| Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer | 1e-2 | -4.646e+00 | 0.0470 | 24.0 | 2.77% | 773.3 | 1.63% | motif file (matrix) |
svg |