p-value: | 1e-17 |
log p-value: | -4.001e+01 |
Information Content per bp: | 1.763 |
Number of Target Sequences with motif | 27.0 |
Percentage of Target Sequences with motif | 3.12% |
Number of Background Sequences with motif | 152.7 |
Percentage of Background Sequences with motif | 0.32% |
Average Position of motif in Targets | 52.2 +/- 23.1bp |
Average Position of motif in Background | 45.9 +/- 30.8bp |
Strand Bias (log2 ratio + to - strand density) | -0.2 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer
Match Rank: | 1 |
Score: | 0.89 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GAACAATGRC GAACAATGGN |
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SOX9/MA0077.1/Jaspar
Match Rank: | 2 |
Score: | 0.89 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GAACAATGRC GAACAATGG- |
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PB0070.1_Sox30_1/Jaspar
Match Rank: | 3 |
Score: | 0.87 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---GAACAATGRC--- AATGAACAATGGAATT |
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Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer
Match Rank: | 4 |
Score: | 0.87 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GAACAATGRC RAACAATGGN |
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Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer
Match Rank: | 5 |
Score: | 0.86 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GAACAATGRC VRAACAATGG- |
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PB0183.1_Sry_2/Jaspar
Match Rank: | 6 |
Score: | 0.85 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----GAACAATGRC-- TCACGGAACAATAGGTG |
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PB0173.1_Sox21_2/Jaspar
Match Rank: | 7 |
Score: | 0.84 |
Offset: | -5 |
Orientation: | reverse strand |
Alignment: | -----GAACAATGRC-- NNNNNGAACAATTGANN |
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PB0072.1_Sox5_1/Jaspar
Match Rank: | 8 |
Score: | 0.84 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----GAACAATGRC-- TTTAGAACAATAAAAT |
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PB0065.1_Sox15_1/Jaspar
Match Rank: | 9 |
Score: | 0.83 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----GAACAATGRC--- TAGTGAACAATAGATTT |
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PB0073.1_Sox7_1/Jaspar
Match Rank: | 10 |
Score: | 0.83 |
Offset: | -6 |
Orientation: | forward strand |
Alignment: | ------GAACAATGRC------ AATAAAGAACAATAGAATTTCA |
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