Information for 8-GTGCGTGACG (Motif 13)

A C T G A G C T A C T G A G T C A C T G A G C T A T C G G C T A A T G C A T C G
Reverse Opposite:
A T G C A T C G C G A T A T G C C T G A A G T C A C T G A G T C T C G A A G T C
p-value:1e-10
log p-value:-2.491e+01
Information Content per bp:1.853
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.50%
Number of Background Sequences with motif49.1
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets39.2 +/- 28.4bp
Average Position of motif in Background48.9 +/- 23.1bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:1
Score:0.77
Offset:1
Orientation:forward strand
Alignment:GTGCGTGACG
-TGCGTG---
 A C T G A G C T A C T G A G T C A C T G A G C T A T C G G C T A A T G C A T C G
A C G T G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:2
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:GTGCGTGACG
TTGCGTGCVA
 A C T G A G C T A C T G A G T C A C T G A G C T A T C G G C T A A T G C A T C G
A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A

PAX1/MA0779.1/Jaspar

Match Rank:3
Score:0.69
Offset:-7
Orientation:reverse strand
Alignment:-------GTGCGTGACG
NGCANTCATGCGTGACG
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G C T A C T G A G T C A C T G A G C T A T C G G C T A A T G C A T C G
C A G T A C T G G T A C C T G A A T C G A G C T T A G C C T G A C G A T A T C G G A T C C T A G A C G T C T A G C G T A G T A C T A C G

Pax2/MA0067.1/Jaspar

Match Rank:4
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:GTGCGTGACG
--NCGTGACN
 A C T G A G C T A C T G A G T C A C T G A G C T A T C G G C T A A T G C A T C G
A C G T A C G T T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T

PAX9/MA0781.1/Jaspar

Match Rank:5
Score:0.66
Offset:-7
Orientation:reverse strand
Alignment:-------GTGCGTGACG
TGCAGTCATGCGTGACG
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G C T A C T G A G T C A C T G A G C T A T C G G C T A A T G C A T C G
C A G T A C T G G T A C C T G A A T C G A G C T A T G C C T G A C G A T A T C G A G T C C T A G A C G T C T A G C G T A G T A C T A C G

KLF14/MA0740.1/Jaspar

Match Rank:6
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----GTGCGTGACG
AAGGGGGCGTGGCC
 A C G T A C G T A C G T A C G T A C T G A G C T A C T G A G T C A C T G A G C T A T C G G C T A A T G C A T C G
C T G A C T G A C T A G C A T G T C A G T C A G A T C G A G T C C A T G A C G T T C A G C A T G A G T C G T A C

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----GTGCGTGACG
TCAGNGAGCGTGAC-
 A C G T A C G T A C G T A C G T A C G T A C T G A G C T A C T G A G T C A C T G A G C T A T C G G C T A A T G C A T C G
A C G T T A G C T C G A A T C G T A C G T C A G C T G A A T C G A G T C C T A G G A C T C T A G C T G A T G A C A C G T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:8
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GTGCGTGACG
GGACGTGC--
 A C T G A G C T A C T G A G T C A C T G A G C T A T C G G C T A A T G C A T C G
T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C A C G T A C G T

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:9
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GTGCGTGACG
DGGGYGKGGC-
 A C G T A C T G A G C T A C T G A G T C A C T G A G C T A T C G G C T A A T G C A T C G
C G T A C T A G A C T G A C T G G A C T C T A G C A G T C T A G C A T G G A T C A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:10
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----GTGCGTGACG--
NNGCGTGTGTGCNGCN
 A C G T A C G T A C G T A C G T A C T G A G C T A C T G A G T C A C T G A G C T A T C G G C T A A T G C A T C G A C G T A C G T
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T