p-value: | 1e-29 |
log p-value: | -6.783e+01 |
Information Content per bp: | 1.567 |
Number of Target Sequences with motif | 33.0 |
Percentage of Target Sequences with motif | 3.82% |
Number of Background Sequences with motif | 99.8 |
Percentage of Background Sequences with motif | 0.21% |
Average Position of motif in Targets | 53.3 +/- 27.5bp |
Average Position of motif in Background | 45.1 +/- 30.8bp |
Strand Bias (log2 ratio + to - strand density) | -0.5 |
Multiplicity (# of sites on avg that occur together) | 1.03 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer
Match Rank: | 1 |
Score: | 0.89 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TTVAHATGCAAAT CATTGTTATGCAAAT |
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Pou5f1::Sox2/MA0142.1/Jaspar
Match Rank: | 2 |
Score: | 0.88 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --TTVAHATGCAAAT CTTTGTTATGCAAAT |
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POU2F2/MA0507.1/Jaspar
Match Rank: | 3 |
Score: | 0.79 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | TTVAHATGCAAAT--- ---ATATGCAAATNNN |
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Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer
Match Rank: | 4 |
Score: | 0.79 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | TTVAHATGCAAAT ---TTATGCAAAT |
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Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer
Match Rank: | 5 |
Score: | 0.77 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | TTVAHATGCAAAT ---ATATGCAAAT |
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POU2F1/MA0785.1/Jaspar
Match Rank: | 6 |
Score: | 0.75 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | TTVAHATGCAAAT- --AATATGCAAATT |
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POU3F1/MA0786.1/Jaspar
Match Rank: | 7 |
Score: | 0.74 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | TTVAHATGCAAAT-- ---TTATGCAAATTA |
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POU5F1B/MA0792.1/Jaspar
Match Rank: | 8 |
Score: | 0.74 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | TTVAHATGCAAAT ----TATGCAAAT |
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Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer
Match Rank: | 9 |
Score: | 0.74 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | TTVAHATGCAAAT--- ----TATGCWAATBAV |
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Pou2f3/MA0627.1/Jaspar
Match Rank: | 10 |
Score: | 0.74 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | TTVAHATGCAAAT---- -TTGTATGCAAATTAGA |
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