Information for 17-AGTGTAGCCTATAGCC (Motif 29)

C G T A A T C G A C G T A T C G A G C T C G T A A C T G A T G C A G T C A C G T C G T A A C G T C G T A A C T G A T G C A G T C
Reverse Opposite:
A C T G A T C G A G T C A C G T C G T A A C G T C G T A A C T G A T C G A G T C C G A T C T G A A T G C C G T A A T G C A C G T
p-value:1e-4
log p-value:-9.264e+00
Information Content per bp:1.918
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.30%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.5 +/- 1.5bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:1
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:AGTGTAGCCTATAGCC--
----NTGCCCTTGGGCGN
 C G T A A T C G A C G T A T C G A G C T C G T A A C T G A T G C A G T C A C G T C G T A A C G T C G T A A C T G A T G C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T G A T C G C A T T C A G G T A C G A T C G A T C C G A T G A C T C T A G C T A G C A T G A G T C C T A G T A C G

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:2
Score:0.49
Offset:4
Orientation:forward strand
Alignment:AGTGTAGCCTATAGCC--
----TCACCTCTGGGCAG
 C G T A A T C G A C G T A T C G A G C T C G T A A C T G A T G C A G T C A C G T C G T A A C G T C G T A A C T G A T G C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G

PB0128.1_Gcm1_2/Jaspar

Match Rank:3
Score:0.47
Offset:0
Orientation:reverse strand
Alignment:AGTGTAGCCTATAGCC-
NTCNTCCCCTATNNGNN
 C G T A A T C G A C G T A T C G A G C T C G T A A C T G A T G C A G T C A C G T C G T A A C G T C G T A A C T G A T G C A G T C A C G T
T G A C C A G T A G T C T A G C A G C T A G T C T A G C G T A C G T A C A G C T C T G A A G C T C A T G A T G C T A C G G T A C G C T A

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:4
Score:0.47
Offset:3
Orientation:reverse strand
Alignment:AGTGTAGCCTATAGCC
---BCAGACWA-----
 C G T A A T C G A C G T A T C G A G C T C G T A A C T G A T G C A G T C A C G T C G T A A C G T C G T A A C T G A T G C A G T C
A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T

NFY(CCAAT)/Promoter/Homer

Match Rank:5
Score:0.47
Offset:5
Orientation:forward strand
Alignment:AGTGTAGCCTATAGCC
-----AGCCAATCGG-
 C G T A A T C G A C G T A T C G A G C T C G T A A C T G A T G C A G T C A C G T C G T A A C G T C G T A A C T G A T G C A G T C
A C G T A C G T A C G T A C G T A C G T T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G A C G T

PB0051.1_Osr2_1/Jaspar

Match Rank:6
Score:0.45
Offset:-4
Orientation:forward strand
Alignment:----AGTGTAGCCTATAGCC
ATGTACAGTAGCAAAG----
 A C G T A C G T A C G T A C G T C G T A A T C G A C G T A T C G A G C T C G T A A C T G A T G C A G T C A C G T C G T A A C G T C G T A A C T G A T G C A G T C
G C A T C G A T T C A G G C A T G T C A G A T C C T G A A C T G C G A T C T G A A C T G A G T C G C T A G T C A G C T A C T A G A C G T A C G T A C G T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:7
Score:0.45
Offset:2
Orientation:forward strand
Alignment:AGTGTAGCCTATAGCC
--ACTAGCCAATCA--
 C G T A A T C G A C G T A T C G A G C T C G T A A C T G A T G C A G T C A C G T C G T A A C G T C G T A A C T G A T G C A G T C
A C G T A C G T G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A A C G T A C G T

PB0117.1_Eomes_2/Jaspar

Match Rank:8
Score:0.45
Offset:-5
Orientation:forward strand
Alignment:-----AGTGTAGCCTATAGCC
GCGGAGGTGTCGCCTC-----
 A C G T A C G T A C G T A C G T A C G T C G T A A T C G A C G T A T C G A G C T C G T A A C T G A T G C A G T C A C G T C G T A A C G T C G T A A C T G A T G C A G T C
T A C G A T C G T C A G C T A G C T G A T A C G A T C G A G C T T C A G C G A T G A T C A C T G T A G C A G T C A G C T T A G C A C G T A C G T A C G T A C G T A C G T

DMRT3/MA0610.1/Jaspar

Match Rank:9
Score:0.45
Offset:0
Orientation:forward strand
Alignment:AGTGTAGCCTATAGCC
AATGTATCAAT-----
 C G T A A T C G A C G T A T C G A G C T C G T A A C T G A T G C A G T C A C G T C G T A A C G T C G T A A C T G A T G C A G T C
G T C A C G T A C G A T A C T G A C G T C G T A C G A T A G T C G T C A C G T A A C G T A C G T A C G T A C G T A C G T A C G T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:10
Score:0.45
Offset:4
Orientation:reverse strand
Alignment:AGTGTAGCCTATAGCC---
----TGACCTTTGCCCTAN
 C G T A A T C G A C G T A T C G A G C T C G T A A C T G A T G C A G T C A C G T C G T A A C G T C G T A A C T G A T G C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C