p-value: | 1e-6 |
log p-value: | -1.392e+01 |
Information Content per bp: | 1.959 |
Number of Target Sequences with motif | 4.0 |
Percentage of Target Sequences with motif | 0.60% |
Number of Background Sequences with motif | 5.2 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 33.2 +/- 14.5bp |
Average Position of motif in Background | 36.2 +/- 18.4bp |
Strand Bias (log2 ratio + to - strand density) | 0.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer
Match Rank: | 1 |
Score: | 0.64 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CTAATAGCCT CTAATKGV-- |
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SD0003.1_at_AC_acceptor/Jaspar
Match Rank: | 2 |
Score: | 0.64 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CTAATAGCCT- AAGATATCCTT |
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Barhl1/MA0877.1/Jaspar
Match Rank: | 3 |
Score: | 0.63 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -CTAATAGCCT GCTAATTGCT- |
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Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer
Match Rank: | 4 |
Score: | 0.63 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CTAATAGCCT GTTAATGGCC- |
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BARX1/MA0875.1/Jaspar
Match Rank: | 5 |
Score: | 0.63 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CTAATAGCCT NTAATTGN-- |
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Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer
Match Rank: | 6 |
Score: | 0.61 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CTAATAGCCT NTAATKGTTT |
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PB0135.1_Hoxa3_2/Jaspar
Match Rank: | 7 |
Score: | 0.61 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --CTAATAGCCT-- CCTTAATNGNTTTT |
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SD0002.1_at_AC_acceptor/Jaspar
Match Rank: | 8 |
Score: | 0.59 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CTAATAGCCT- NNACTTGCCTT |
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VENTX/MA0724.1/Jaspar
Match Rank: | 9 |
Score: | 0.58 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CTAATAGCCT CTAATCGNT- |
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Crx/MA0467.1/Jaspar
Match Rank: | 10 |
Score: | 0.58 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CTAATAGCCT- CTAATCCTCTT |
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