Information for 19-TCTYTTSYCWTTG (Motif 24)

A C G T A G T C A C G T A G T C A G C T A G C T A T G C A G T C A G T C C G T A A C G T A C G T A T C G
Reverse Opposite:
A T G C C G T A C G T A C G A T A C T G C T A G A T C G C T G A C T G A C T A G C G T A A C T G C G T A
p-value:1e-8
log p-value:-1.858e+01
Information Content per bp:1.871
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.90%
Number of Background Sequences with motif10.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets67.5 +/- 27.6bp
Average Position of motif in Background50.7 +/- 26.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0132.1_Hbp1_2/Jaspar

Match Rank:1
Score:0.62
Offset:2
Orientation:forward strand
Alignment:TCTYTTSYCWTTG------
--TGTTCCCATTGTGTACT
 A C G T A G T C A C G T A G T C A G C T A G C T A T G C A G T C A G T C C G T A A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G A T C T A G C A G T A G C T A G T C G A T C G A T C C G T A G A C T C G A T C A T G C A G T T C A G G A C T C T G A A T G C G C A T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:2
Score:0.59
Offset:7
Orientation:forward strand
Alignment:TCTYTTSYCWTTG--
-------CCWTTGTY
 A C G T A G T C A C G T A G T C A G C T A G C T A T G C A G T C A G T C C G T A A C G T A C G T A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:3
Score:0.58
Offset:7
Orientation:forward strand
Alignment:TCTYTTSYCWTTG----
-------CCWTTGTYYB
 A C G T A G T C A C G T A G T C A G C T A G C T A T G C A G T C A G T C C G T A A C G T A C G T A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G

Sox2/MA0143.3/Jaspar

Match Rank:4
Score:0.58
Offset:7
Orientation:forward strand
Alignment:TCTYTTSYCWTTG--
-------CCTTTGTT
 A C G T A G T C A C G T A G T C A G C T A G C T A T G C A G T C A G T C C G T A A C G T A C G T A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T

Mecom/MA0029.1/Jaspar

Match Rank:5
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---TCTYTTSYCWTTG
TNTTATCTTATCTT--
 A C G T A C G T A C G T A C G T A G T C A C G T A G T C A G C T A G C T A T G C A G T C A G T C C G T A A C G T A C G T A T C G
A C G T T A C G A G C T C G A T C T G A A C G T A G T C A G C T A C G T C T G A A C G T T A G C G C A T G A C T A C G T A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.56
Offset:6
Orientation:forward strand
Alignment:TCTYTTSYCWTTG---
------NCCATTGTTC
 A C G T A G T C A C G T A G T C A G C T A G C T A T G C A G T C A G T C C G T A A C G T A C G T A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C

SOX10/MA0442.1/Jaspar

Match Rank:7
Score:0.56
Offset:8
Orientation:forward strand
Alignment:TCTYTTSYCWTTG-
--------CTTTGT
 A C G T A G T C A C G T A G T C A G C T A G C T A T G C A G T C A G T C C G T A A C G T A C G T A T C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:8
Score:0.56
Offset:7
Orientation:forward strand
Alignment:TCTYTTSYCWTTG----
-------CCATTGTTYB
 A C G T A G T C A C G T A G T C A G C T A G C T A T G C A G T C A G T C C G T A A C G T A C G T A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G

Sox6/MA0515.1/Jaspar

Match Rank:9
Score:0.56
Offset:7
Orientation:forward strand
Alignment:TCTYTTSYCWTTG----
-------CCATTGTTTT
 A C G T A G T C A C G T A G T C A G C T A G C T A T G C A G T C A G T C C G T A A C G T A C G T A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:10
Score:0.55
Offset:7
Orientation:forward strand
Alignment:TCTYTTSYCWTTG----
-------YCTTTGTTCC
 A C G T A G T C A C G T A G T C A G C T A G C T A T G C A G T C A G T C C G T A A C G T A C G T A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C