Information for 14-RAASCWATGSAGA (Motif 14)

C T A G C G T A C G T A A T C G A G T C C G T A C T G A A C G T A C T G T A G C C G T A A C T G C G T A
Reverse Opposite:
A C G T A G T C A C G T A T C G A G T C C G T A A G C T C G A T A C T G A T G C A C G T A C G T A G T C
p-value:1e-9
log p-value:-2.074e+01
Information Content per bp:1.876
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif3.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets65.6 +/- 32.4bp
Average Position of motif in Background41.2 +/- 5.3bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0148.1_Pou3f3/Jaspar

Match Rank:1
Score:0.59
Offset:1
Orientation:forward strand
Alignment:RAASCWATGSAGA-----
-AAAATATGCATAATAAA
 C T A G C G T A C G T A A T C G A G T C C G T A C T G A A C G T A C T G T A G C C G T A A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T G C T A G C T A C T A G C G T A G A C T G C T A G A C T C A T G G T A C C T G A C G A T C G T A G C T A C A G T C T G A C G T A C G T A

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:2
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:RAASCWATGSAGA
VRAACAATGG---
 C T A G C G T A C G T A A T C G A G T C C G T A C T G A A C G T A C T G T A G C C G T A A C T G C G T A
T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G A C G T A C G T A C G T

PH0006.1_Barhl2/Jaspar

Match Rank:3
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--RAASCWATGSAGA-
AAAAACCAATTAAGAA
 A C G T A C G T C T A G C G T A C G T A A T C G A G T C C G T A C T G A A C G T A C T G T A G C C G T A A C T G C G T A A C G T
G T C A G T C A G T C A C T G A T C G A G A T C A G T C C T G A G C T A A C G T A C G T C G T A C T G A A T C G G C T A G C T A

SOX9/MA0077.1/Jaspar

Match Rank:4
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:RAASCWATGSAGA
-GAACAATGG---
 C T A G C G T A C G T A A T C G A G T C C G T A C T G A A C G T A C T G T A G C C G T A A C T G C G T A
A C G T C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G A C G T A C G T A C G T

Sox6/MA0515.1/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:RAASCWATGSAGA
AAAACAATGG---
 C T A G C G T A C G T A A T C G A G T C C G T A C T G A A C G T A C T G T A G C C G T A A C T G C G T A
T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G A C G T A C G T A C G T

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:6
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--RAASCWATGSAGA
HNRAATCAAT-----
 A C G T A C G T C T A G C G T A C G T A A T C G A G T C C G T A C T G A A C G T A C T G T A G C C G T A A C T G C G T A
G C T A A C T G T C G A C T G A C T G A A C G T T A G C C T G A C G T A C G A T A C G T A C G T A C G T A C G T A C G T

POU5F1B/MA0792.1/Jaspar

Match Rank:7
Score:0.56
Offset:5
Orientation:forward strand
Alignment:RAASCWATGSAGA-
-----TATGCAAAT
 C T A G C G T A C G T A A T C G A G T C C G T A C T G A A C G T A C T G T A G C C G T A A C T G C G T A A C G T
A C G T A C G T A C G T A C G T A C G T G A C T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:8
Score:0.56
Offset:5
Orientation:forward strand
Alignment:RAASCWATGSAGA----
-----TATGCWAATBAV
 C T A G C G T A C G T A A T C G A G T C C G T A C T G A A C G T A C T G T A G C C G T A A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G

Gfi1b/MA0483.1/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:forward strand
Alignment:RAASCWATGSAGA
AAATCACAGCA--
 C T A G C G T A C G T A A T C G A G T C C G T A C T G A A C G T A C T G T A G C C G T A A C T G C G T A
T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A A C G T A C G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:RAASCWATGSAGA-
----TTATGCAAAT
 C T A G C G T A C G T A A T C G A G T C C G T A C T G A A C G T A C T G T A G C C G T A A C T G C G T A A C G T
A C G T A C G T A C G T A C G T C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T