Information for 9-AGKAAAYTCTGYM (Motif 8)

C G T A A C T G A C G T C G T A C G T A C G T A A G T C G A C T A G T C A C G T A C T G A G T C G T C A
Reverse Opposite:
A C G T C T A G A G T C C G T A A C T G C G T A C T A G A C G T A C G T A C G T G T C A A G T C A C G T
p-value:1e-12
log p-value:-2.800e+01
Information Content per bp:1.873
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.88%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets61.7 +/- 26.0bp
Average Position of motif in Background44.0 +/- 11.5bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:1
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---AGKAAAYTCTGYM
NACAGGAAAT------
 A C G T A C G T A C G T C G T A A C T G A C G T C G T A C G T A C G T A A G T C G A C T A G T C A C G T A C T G A G T C G T C A
T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AGKAAAYTCTGYM-
VAGRACAKWCTGTYC
 A C G T C G T A A C T G A C G T C G T A C G T A C G T A A G T C G A C T A G T C A C G T A C T G A G T C G T C A A C G T
T G A C C T G A C T A G C T G A C G T A A G T C C T G A A C G T G C A T T A G C G C A T A T C G G A C T G A C T G A T C

RELA/MA0107.1/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:AGKAAAYTCTGYM
-GGAAATTCCC--
 C G T A A C T G A C G T C G T A C G T A C G T A A G T C G A C T A G T C A C G T A C T G A G T C G T C A
A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C A C G T A C G T

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:4
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AGKAAAYTCTGYM-
VAGRACAKNCTGTBC
 A C G T C G T A A C T G A C G T C G T A C G T A C G T A A G T C G A C T A G T C A C G T A C T G A G T C G T C A A C G T
T G A C C T G A C T A G T C G A C T G A A T G C C G T A A C T G G C A T G T A C G C A T A T C G G C A T A G C T G A T C

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:5
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---AGKAAAYTCTGYM
NACAGGAAAT------
 A C G T A C G T A C G T C G T A A C T G A C G T C G T A C G T A C G T A A G T C G A C T A G T C A C G T A C T G A G T C G T C A
T G C A C T G A A G T C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T

EBNA1(EBV-virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer

Match Rank:6
Score:0.58
Offset:-7
Orientation:reverse strand
Alignment:-------AGKAAAYTCTGYM
NNNGGGHAGCAHRTGCTRCC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C G T C G T A C G T A C G T A A G T C G A C T A G T C A C G T A C T G A G T C G T C A
A T G C A G T C G C A T C T A G A C T G C T A G G A C T C G T A C T A G A G T C T G C A G C A T C T G A A C G T T C A G A G T C A C G T C T A G A G T C A G T C

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:7
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AGKAAAYTCTGYM
-GGAAATTCCC--
 C G T A A C T G A C G T C G T A C G T A C G T A A G T C G A C T A G T C A C G T A C T G A G T C G T C A
A C G T A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C A C G T A C G T

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:8
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AGKAAAYTCTGYM-
AAGAACATWHTGTTC
 A C G T C G T A A C T G A C G T C G T A C G T A C G T A A G T C G A C T A G T C A C G T A C T G A G T C G T C A A C G T
C G T A C T G A C T A G C G T A C G T A A G T C C G T A C A G T G C A T G T C A C G A T A C T G A C G T G C A T G A T C

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:9
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--AGKAAAYTCTGYM
AAAGTAAACA-----
 A C G T A C G T C G T A A C T G A C G T C G T A C G T A C G T A A G T C G A C T A G T C A C G T A C T G A G T C G T C A
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:10
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--AGKAAAYTCTGYM
AAAGTAAACA-----
 A C G T A C G T C G T A A C T G A C G T C G T A C G T A C G T A A G T C G A C T A G T C A C G T A C T G A G T C G T C A
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T