Information for 22-TYYCMTCTSCAGG (Motif 34)

A C G T A G C T A G C T A G T C G T C A A C G T A G T C A C G T A T C G A G T C C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T A C T G A T G C C G T A A C T G C G T A A C G T A C T G C T G A C T G A C G T A
p-value:1e-7
log p-value:-1.719e+01
Information Content per bp:1.884
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif6.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets66.8 +/- 19.6bp
Average Position of motif in Background43.2 +/- 15.6bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----TYYCMTCTSCAGG--
TTTTTTTTTTTTTTCAGGTT
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G C T A G T C G T C A A C G T A G T C A C G T A T C G A G T C C G T A A C T G A C T G A C G T A C G T
G A C T A G C T A G C T G A C T G A C T A G C T A G C T A G C T A G C T G A C T G A C T G A C T G A C T G A C T G A T C C G T A A C T G T C A G G C A T C G A T

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----TYYCMTCTSCAGG--
TTTTTTTTTTTTTTCAGGTT
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G C T A G T C G T C A A C G T A G T C A C G T A T C G A G T C C G T A A C T G A C T G A C G T A C G T
G A C T G A C T A G C T A G C T A G C T A G C T A G C T A G C T A G C T G A C T G A C T G A C T G A C T G A C T G A T C C G T A A C T G T C A G C G A T C G A T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.58
Offset:4
Orientation:forward strand
Alignment:TYYCMTCTSCAGG---
----CACAGCAGGGGG
 A C G T A G C T A G C T A G T C G T C A A C G T A G T C A C G T A T C G A G T C C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------TYYCMTCTSCAGG-
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G C T A G T C G T C A A C G T A G T C A C G T A T C G A G T C C G T A A C T G A C T G A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

CTCF/MA0139.1/Jaspar

Match Rank:5
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---TYYCMTCTSCAGG---
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C G T A C G T A G C T A G C T A G T C G T C A A C G T A G T C A C G T A T C G A G T C C G T A A C T G A C T G A C G T A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:6
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:TYYCMTCTSCAGG
---DCTCAGCAGG
 A C G T A G C T A G C T A G T C G T C A A C G T A G T C A C G T A T C G A G T C C G T A A C T G A C T G
A C G T A C G T A C G T C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----TYYCMTCTSCAGG---
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C G T A G C T A G C T A G T C G T C A A C G T A G T C A C G T A T C G A G T C C G T A A C T G A C T G A C G T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:8
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:TYYCMTCTSCAGG-----
---DCHCAGCAGGRGGCC
 A C G T A G C T A G C T A G T C G T C A A C G T A G T C A C G T A T C G A G T C C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:9
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TYYCMTCTSCAGG---
-NNNCTTTCCAGGAAA
 A C G T A G C T A G C T A G T C G T C A A C G T A G T C A C G T A T C G A G T C C G T A A C T G A C T G A C G T A C G T A C G T
A C G T G A C T C G A T T C A G G A T C G A C T A G C T A G C T A G T C G A T C C G T A C T A G C T A G T C G A T C G A C T G A

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TYYCMTCTSCAGG---
NTNNCGTATCCAAGTNN
 A C G T A C G T A G C T A G C T A G T C G T C A A C G T A G T C A C G T A T C G A G T C C G T A A C T G A C T G A C G T A C G T A C G T
C G T A C G A T G C A T A T G C A T G C C T A G G A C T G T C A C G A T A G T C A G T C C T G A G T C A T A C G A G C T T G C A T A C G