Information for 8-AGYTGTCATGATTATT (Motif 17)

C G T A C T A G A G T C A C G T A C T G A G C T A G T C C G T A A C G T T A C G C G T A C A G T C A G T G T C A A C G T G C A T
Reverse Opposite:
C G T A G T C A C A G T G T C A G T C A C G A T A T G C C G T A A C G T A C T G C T G A T G A C T C G A T C A G G A T C G C A T
p-value:1e-11
log p-value:-2.588e+01
Information Content per bp:1.723
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.02%
Number of Background Sequences with motif6.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.9 +/- 29.7bp
Average Position of motif in Background47.5 +/- 30.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0164.1_Six4/Jaspar

Match Rank:1
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----AGYTGTCATGATTATT
TNNNNGGTGTCATNTNT---
 A C G T A C G T A C G T A C G T C G T A C T A G A G T C A C G T A C T G A G C T A G T C C G T A A C G T T A C G C G T A C A G T C A G T G T C A A C G T G C A T
A G C T T C A G T C G A C A G T C T G A T C A G A C T G A C G T C T A G A C G T G T A C C T G A C G A T C A G T G A C T G T C A C A G T A C G T A C G T A C G T

PH0169.1_Tgif1/Jaspar

Match Rank:2
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----AGYTGTCATGATTATT
NNNCAGCTGTCAATATN---
 A C G T A C G T A C G T A C G T C G T A C T A G A G T C A C G T A C T G A G C T A G T C C G T A A C G T T A C G C G T A C A G T C A G T G T C A A C G T G C A T
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C A C G T A C G T A C G T

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:3
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:AGYTGTCATGATTATT
----GTCATN------
 C G T A C T A G A G T C A C G T A C T G A G C T A G T C C G T A A C G T T A C G C G T A C A G T C A G T G T C A A C G T G C A T
A C G T A C G T A C G T A C G T T C A G A C G T G A T C C G T A A G C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T

OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:4
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:AGYTGTCATGATTATT---
----CTCATGAATATTCAT
 C G T A C T A G A G T C A C G T A C T G A G C T A G T C C G T A A C G T T A C G C G T A C A G T C A G T G T C A A C G T G C A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A G C G A C T G A T C C G T A A C G T T C A G G T C A C G T A A C G T C G T A C G A T A C G T A G T C C G T A C G A T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:5
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AGYTGTCATGATTATT
ARNTGACA--------
 C G T A C T A G A G T C A C G T A C T G A G C T A G T C C G T A A C G T T A C G C G T A C A G T C A G T G T C A A C G T G C A T
T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:6
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:AGYTGTCATGATTATT
--NTGTCAN-------
 C G T A C T A G A G T C A C G T A C T G A G C T A G T C C G T A A C G T T A C G C G T A C A G T C A G T G T C A A C G T G C A T
A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:7
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AGYTGTCATGATTATT
-CCTGTCAA-------
 C G T A C T A G A G T C A C G T A C T G A G C T A G T C C G T A A C G T T A C G C G T A C A G T C A G T G T C A A C G T G C A T
A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0102.1_Meis1/Jaspar

Match Rank:8
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----AGYTGTCATGATTATT
AACGAGCTGTCAATAC----
 A C G T A C G T A C G T A C G T C G T A C T A G A G T C A C G T A C T G A G C T A G T C C G T A A C G T T A C G C G T A C A G T C A G T G T C A A C G T G C A T
C G T A C G T A T A C G A T C G C T G A A T C G T G A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A G A T C A C G T A C G T A C G T A C G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:9
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AGYTGTCATGATTATT
AGGTGTCA--------
 C G T A C T A G A G T C A C G T A C T G A G C T A G T C C G T A A C G T T A C G C G T A C A G T C A G T G T C A A C G T G C A T
C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:10
Score:0.59
Offset:2
Orientation:forward strand
Alignment:AGYTGTCATGATTATT
--YTGWCADY------
 C G T A C T A G A G T C A C G T A C T G A G C T A G T C C G T A A C G T T A C G C G T A C A G T C A G T G T C A A C G T G C A T
A C G T A C G T G A C T G C A T C T A G C G A T G A T C T C G A C A T G G A T C A C G T A C G T A C G T A C G T A C G T A C G T