Information for 10-CGGYTGCYSYTCT (Motif 16)

A G T C A C T G A C T G A G C T A C G T A C T G A G T C A G C T A T G C A G C T A C G T A G T C A C G T
Reverse Opposite:
C G T A A C T G C G T A C T G A A T C G C T G A A C T G A G T C C G T A T C G A A G T C G T A C A C T G
p-value:1e-7
log p-value:-1.739e+01
Information Content per bp:1.875
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif9.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets48.5 +/- 30.2bp
Average Position of motif in Background50.0 +/- 26.8bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0033.1_Irf3_1/Jaspar

Match Rank:1
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CGGYTGCYSYTCT-
CAGTTTCGNTTCTN
 A G T C A C T G A C T G A G C T A C G T A C T G A G T C A G C T A T G C A G C T A C G T A G T C A C G T A C G T
A G T C C T G A A T C G C A G T C G A T A C G T A G T C A T C G C A T G C G A T G C A T G A T C G A C T T A G C

ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CGGYTGCYSYTCT
GTCWGCTGTYYCTCT
 A C G T A C G T A G T C A C T G A C T G A G C T A C G T A C T G A G T C A G C T A T G C A G C T A C G T A G T C A C G T
C T A G A C G T A G T C C G T A A C T G A G T C G C A T A C T G G C A T A G T C G A C T G A T C G C A T A G T C A G C T

PB0003.1_Ascl2_1/Jaspar

Match Rank:3
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----CGGYTGCYSYTCT
CTCAGCAGCTGCTACTG-
 A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C T G A G C T A C G T A C T G A G T C A G C T A T G C A G C T A C G T A G T C A C G T
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:4
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CGGYTGCYSYTCT
AGCAGCTGCTNN---
 A C G T A C G T A G T C A C T G A C T G A G C T A C G T A C T G A G T C A G C T A T G C A G C T A C G T A G T C A C G T
C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C A C G T A C G T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:5
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CGGYTGCYSYTCT
AGCAGCTGCT-----
 A C G T A C G T A G T C A C T G A C T G A G C T A C G T A C T G A G T C A G C T A T G C A G C T A C G T A G T C A C G T
T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T A C G T

Myod1/MA0499.1/Jaspar

Match Rank:6
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CGGYTGCYSYTCT
TGCAGCTGTCCCT--
 A C G T A C G T A G T C A C T G A C T G A G C T A C G T A C T G A G T C A G C T A T G C A G C T A C G T A G T C A C G T
G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T A C G T A C G T

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:CGGYTGCYSYTCT-
--GTTTCACTTCCG
 A G T C A C T G A C T G A G C T A C G T A C T G A G T C A G C T A T G C A G C T A C G T A G T C A C G T A C G T
A C G T A C G T A T C G G A C T A C G T A G C T A G T C G C T A A G T C G C A T A C G T A G T C G A T C A C T G

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CGGYTGCYSYTCT
NCAGCTGCTG----
 A C G T A G T C A C T G A C T G A G C T A C G T A C T G A G T C A G C T A T G C A G C T A C G T A G T C A C G T
T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G A C G T A C G T A C G T A C G T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:CGGYTGCYSYTCT-
----TKCTGTTCCA
 A G T C A C T G A C T G A G C T A C G T A C T G A G T C A G C T A T G C A G C T A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A G T T A G C A G C T T A C G C G A T A C G T A G T C G T A C G T C A

NHLH1/MA0048.2/Jaspar

Match Rank:10
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--CGGYTGCYSYTCT
CGCAGCTGCG-----
 A C G T A C G T A G T C A C T G A C T G A G C T A C G T A C T G A G T C A G C T A T G C A G C T A C G T A G T C A C G T
T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G A C G T A C G T A C G T A C G T A C G T