Information for 11-GGGAAATTTC (Motif 15)

C T A G A C T G A C T G G T C A C G T A C G T A A C G T A C G T A C G T A G T C
Reverse Opposite:
A C T G C G T A C G T A C G T A A C G T A C G T A C G T G T A C G T A C A G T C
p-value:1e-7
log p-value:-1.840e+01
Information Content per bp:1.917
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.89%
Number of Background Sequences with motif21.5
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets45.8 +/- 18.6bp
Average Position of motif in Background52.0 +/- 27.0bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:1
Score:0.75
Offset:1
Orientation:forward strand
Alignment:GGGAAATTTC-
-GGAAATTCCC
 C T A G A C T G A C T G G T C A C G T A C G T A A C G T A C G T A C G T A G T C A C G T
A C G T A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C

RELA/MA0107.1/Jaspar

Match Rank:2
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:GGGAAATTTC-
-GGAAATTCCC
 C T A G A C T G A C T G G T C A C G T A C G T A A C G T A C G T A C G T A G T C A C G T
A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:3
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-GGGAAATTTC-
NGGGGATTTCCC
 A C G T C T A G A C T G A C T G G T C A C G T A C G T A A C G T A C G T A C G T A G T C A C G T
C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C

REL/MA0101.1/Jaspar

Match Rank:4
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GGGAAATTTC
GGGGATTTCC
 C T A G A C T G A C T G G T C A C G T A C G T A A C G T A C G T A C G T A G T C
A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C

MF0003.1_REL_class/Jaspar

Match Rank:5
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GGGAAATTTC
GGGGATTTCC
 C T A G A C T G A C T G G T C A C G T A C G T A A C G T A C G T A C G T A G T C
A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:6
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GGGAAATTTC
NACAGGAAAT---
 A C G T A C G T A C G T C T A G A C T G A C T G G T C A C G T A C G T A A C G T A C G T A C G T A G T C
T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T

HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----GGGAAATTTC-----
NNTTCTGGAANNTTCTAGAA
 A C G T A C G T A C G T A C G T A C G T C T A G A C T G A C T G G T C A C G T A C G T A A C G T A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A T G C T A G C A G C T A G C T T G A C G A C T T C A G T A C G G T C A C T G A A T C G T A G C G A C T C A G T A G T C A G C T T C G A A T C G T G C A T G C A

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----GGGAAATTTC
GAAAGTGAAAGT--
 A C G T A C G T A C G T A C G T C T A G A C T G A C T G G T C A C G T A C G T A A C G T A C G T A C G T A G T C
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T A C G T

NFATC1/MA0624.1/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GGGAAATTTC
NNTGGAAANN--
 A C G T A C G T C T A G A C T G A C T G G T C A C G T A C G T A A C G T A C G T A C G T A G T C
C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:10
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GGGAAATTTC
CSTGGGAAAD---
 A C G T A C G T A C G T C T A G A C T G A C T G G T C A C G T A C G T A A C G T A C G T A C G T A G T C
A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T A C G T