Information for 9-GCAYGCACCA (Motif 12)

A C T G A G T C C G T A A G C T A C T G A G T C C G T A A G T C A G T C C G T A
Reverse Opposite:
A C G T A C T G A C T G A C G T A C T G G T A C C T G A A C G T C T A G A G T C
p-value:1e-8
log p-value:-1.916e+01
Information Content per bp:1.906
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif12.6
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets43.4 +/- 26.2bp
Average Position of motif in Background50.6 +/- 24.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:1
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GCAYGCACCA
TBGCACGCAA--
 A C G T A C G T A C T G A G T C C G T A A G C T A C T G A G T C C G T A A G T C A G T C C G T A
G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A A C G T A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GCAYGCACCA
-CACGCA---
 A C T G A G T C C G T A A G C T A C T G A G T C C G T A A G T C A G T C C G T A
A C G T A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T A C G T

NRF(NRF)/Promoter/Homer

Match Rank:3
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----GCAYGCACCA
GTGCGCATGCGC--
 A C G T A C G T A C G T A C G T A C T G A G T C C G T A A G C T A C T G A G T C C G T A A G T C A G T C C G T A
A T C G A G C T A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C A C G T A C G T

HES7/MA0822.1/Jaspar

Match Rank:4
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GCAYGCACCA
TGGCACGTGCCA
 A C G T A C G T A C T G A G T C C G T A A G C T A C T G A G T C C G T A A G T C A G T C C G T A
G A C T T C A G T C A G G A T C T C G A A G T C C T A G G A C T T C A G G A T C A G T C C T G A

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----GCAYGCACCA
CTGCGCATGCGC--
 A C G T A C G T A C G T A C G T A C T G A G T C C G T A A G C T A C T G A G T C C G T A A G T C A G T C C G T A
A T G C A G C T T C A G T G A C T C A G A T G C T G C A A C G T A T C G G A T C A C T G A G T C A C G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:6
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----GCAYGCACCA--
AGCGGCACACACGCAA
 A C G T A C G T A C G T A C G T A C T G A G T C C G T A A G C T A C T G A G T C C G T A A G T C A G T C C G T A A C G T A C G T
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

PB0095.1_Zfp161_1/Jaspar

Match Rank:7
Score:0.56
Offset:-6
Orientation:reverse strand
Alignment:------GCAYGCACCA
NCANGCGCGCGCGCCA
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A G C T A C T G A G T C C G T A A G T C A G T C C G T A
G C A T G A T C C T G A C T A G C T A G G A T C T C A G G A T C C T A G A G T C C T A G A G T C T A C G G A T C G A T C G T C A

NRF1/MA0506.1/Jaspar

Match Rank:8
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---GCAYGCACCA
TGCGCAGGCGC--
 A C G T A C G T A C G T A C T G A G T C C G T A A G C T A C T G A G T C C G T A A G T C A G T C C G T A
A G C T A C T G A T G C C T A G A G T C T G C A A C T G T A C G A G T C A C T G A G T C A C G T A C G T

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:9
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GCAYGCACCA
GCACGTACCC
 A C T G A G T C C G T A A G C T A C T G A G T C C G T A A G T C A G T C C G T A
C A T G A G T C C T G A T G A C A T C G G A C T G T C A A G T C T A G C G A T C

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:10
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GCAYGCACCA
GCACGTAY--
 A C T G A G T C C G T A A G C T A C T G A G T C C G T A A G T C A G T C C G T A
C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T A C G T A C G T