Information for 15-KGCCTGACTK (Motif 26)

A C G T A C T G A G T C A T G C A G C T A C T G C G T A G A T C A C G T A C T G
Reverse Opposite:
T G A C C G T A C T A G A C G T A G T C C T G A T A C G A C T G A G T C T G C A
p-value:1e-7
log p-value:-1.797e+01
Information Content per bp:1.770
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.06%
Number of Background Sequences with motif187.4
Percentage of Background Sequences with motif0.41%
Average Position of motif in Targets47.6 +/- 21.7bp
Average Position of motif in Background52.5 +/- 30.5bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax2/MA0067.1/Jaspar

Match Rank:1
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:KGCCTGACTK
-NCGTGACN-
 A C G T A C T G A G T C A T G C A G C T A C T G C G T A G A T C A C G T A C T G
A C G T T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:2
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----KGCCTGACTK-
GTCATGCHTGRCTGS
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A T G C A G C T A C T G C G T A G A T C A C G T A C T G A C G T
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C

Dux/MA0611.1/Jaspar

Match Rank:3
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:KGCCTGACTK-
---TTGATTGN
 A C G T A C T G A G T C A T G C A G C T A C T G C G T A G A T C A C G T A C T G A C G T
A C G T A C G T A C G T G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:4
Score:0.68
Offset:0
Orientation:forward strand
Alignment:KGCCTGACTK
TGCGTG----
 A C G T A C T G A G T C A T G C A G C T A C T G C G T A G A T C A C G T A C T G
G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:5
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-KGCCTGACTK
TTGCGTGCVA-
 A C G T A C G T A C T G A G T C A T G C A G C T A C T G C G T A G A T C A C G T A C T G
A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A A C G T

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--KGCCTGACTK
GTGGCGTGACNG
 A C G T A C G T A C G T A C T G A G T C A T G C A G C T A C T G C G T A G A T C A C G T A C T G
T C A G A C G T C A T G A C T G A T G C A T C G A C G T A T C G C T G A A G T C G A T C C A T G

PAX6(Paired,Homeobox)/Forebrain-Pax6-ChIP-Seq(GSE66961)/Homer

Match Rank:7
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----KGCCTGACTK------
TTTMCGCTTSABTGAACACN
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A T G C A G C T A C T G C G T A G A T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A G C T C A G T G A C T T G A C G A T C T C A G A T G C G C A T A G C T T A C G C T G A A T C G G A C T C T A G T G C A T C G A A G T C G C T A A T G C T C G A

Nr2e1/MA0676.1/Jaspar

Match Rank:8
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:KGCCTGACTK--
---TTGACTTTT
 A C G T A C T G A G T C A T G C A G C T A C T G C G T A G A T C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T

Pax6/MA0069.1/Jaspar

Match Rank:9
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----KGCCTGACTK
TTCACGCATGAGTT
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A T G C A G C T A C T G C G T A G A T C A C G T A C T G
A C G T G A C T G A T C G T C A G A T C C A T G A T G C C G T A A G C T A T C G C T G A T A C G A G C T C A G T

PH0037.1_Hdx/Jaspar

Match Rank:10
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-KGCCTGACTK------
TNNNATGATTTCNNCNN
 A C G T A C G T A C T G A G T C A T G C A G C T A C T G C G T A G A T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C A T G T A G C C T A G C T G A C G A T A T C G G T C A G C A T G C A T A C G T G A T C C A T G G T A C T G A C G A C T G C A T