Information for 1-ARCCGGTTSSAACCGG (Motif 1)

T C G A C T A G A G T C A G T C C T A G A T C G A G C T A G C T A T G C T A C G C T G A C T G A A G T C G A T C C T A G A C T G
Reverse Opposite:
A G T C A G T C C T A G A C T G A G C T A G C T A T G C A T C G T C G A C T G A A T G C A G T C C T A G A C T G A G T C A G C T
p-value:1e-129
log p-value:-2.984e+02
Information Content per bp:1.751
Number of Target Sequences with motif171.0
Percentage of Target Sequences with motif18.53%
Number of Background Sequences with motif660.8
Percentage of Background Sequences with motif1.43%
Average Position of motif in Targets52.5 +/- 16.0bp
Average Position of motif in Background51.0 +/- 32.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.23
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.88
Offset:0
Orientation:reverse strand
Alignment:ARCCGGTTSSAACCGG----
AACCGGTTNNAACCGGTTTN
 T C G A C T A G A G T C A G T C C T A G A T C G A G C T A G C T A T G C T A C G C T G A C T G A A G T C G A T C C T A G A C T G A C G T A C G T A C G T A C G T
C T G A C T G A A T G C G A T C C T A G A T C G G A C T G A C T A G C T C T A G C T G A C T G A A T G C G A T C C T A G A T C G G A C T G A C T A G C T A C T G

TFCP2/MA0145.3/Jaspar

Match Rank:2
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-ARCCGGTTSSAACCGG
AAACCGGTTT-------
 A C G T T C G A C T A G A G T C A G T C C T A G A T C G A G C T A G C T A T G C T A C G C T G A C T G A A G T C G A T C C T A G A C T G
C T G A C T G A C G T A A T G C G A T C C T A G A T C G G C A T G C A T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer

Match Rank:3
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:ARCCGGTTSSAACCGG----
NGCATGTCNNGACATGCNNN
 T C G A C T A G A G T C A G T C C T A G A T C G A G C T A G C T A T G C T A C G C T G A C T G A A G T C G A T C C T A G A C T G A C G T A C G T A C G T A C G T
C T A G C T A G A G T C G T C A C G A T A C T G G A C T G A T C A G T C C T A G C T A G C T G A A G T C G C T A C A G T T C A G G A T C G A T C A G C T C A G T

GRHL1/MA0647.1/Jaspar

Match Rank:4
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--ARCCGGTTSSAACCGG
AAAACCGGTTTT------
 A C G T A C G T T C G A C T A G A G T C A G T C C T A G A T C G A G C T A G C T A T G C T A C G C T G A C T G A A G T C G A T C C T A G A C T G
G T C A C G T A C T G A C G T A A G T C G T A C C T A G A T C G G C A T G A C T G C A T C G A T A C G T A C G T A C G T A C G T A C G T A C G T

p73(p53)/Trachea-p73-ChIP-Seq(PRJNA310161)/Homer

Match Rank:5
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:ARCCGGTTSSAACCGG----
RRCATGYCHGGACWTGYYYN
 T C G A C T A G A G T C A G T C C T A G A T C G A G C T A G C T A T G C T A C G C T G A C T G A A G T C G A T C C T A G A C T G A C G T A C G T A C G T A C G T
C T A G C T A G A G T C G C T A C G A T A C T G G A C T G A T C G A C T T C A G C T A G C T G A A T G C G C A T C G A T A C T G G A C T G A T C G A C T C G A T

SPDEF/MA0686.1/Jaspar

Match Rank:6
Score:0.51
Offset:0
Orientation:forward strand
Alignment:ARCCGGTTSSAACCGG
ACCCGGATGTA-----
 T C G A C T A G A G T C A G T C C T A G A T C G A G C T A G C T A T G C T A C G C T G A C T G A A G T C G A T C C T A G A C T G
C G T A T G A C T A G C G T A C T A C G C A T G C T G A G C A T T C A G G A C T C T G A A C G T A C G T A C G T A C G T A C G T

p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer

Match Rank:7
Score:0.51
Offset:0
Orientation:forward strand
Alignment:ARCCGGTTSSAACCGG----
AACATGCCCAGACATGCCCN
 T C G A C T A G A G T C A G T C C T A G A T C G A G C T A G C T A T G C T A C G C T G A C T G A A G T C G A T C C T A G A C T G A C G T A C G T A C G T A C G T
C T A G C T G A A G T C G C T A C G A T A C T G G A C T G A T C G A T C C T G A C T A G C T G A T G A C G C T A C G A T T C A G G A C T G A T C G A T C C A G T

p53(p53)/Saos-p53-ChIP-Seq/Homer

Match Rank:8
Score:0.51
Offset:0
Orientation:forward strand
Alignment:ARCCGGTTSSAACCGG----
AACATGCCCAGACATGCCCN
 T C G A C T A G A G T C A G T C C T A G A T C G A G C T A G C T A T G C T A C G C T G A C T G A A G T C G A T C C T A G A C T G A C G T A C G T A C G T A C G T
C T A G C T G A A G T C G C T A C G A T A C T G G A C T G A T C G A T C C T G A C T A G C T G A T G A C G C T A C G A T T C A G G A C T G A T C G A T C C A G T

ETV2/MA0762.1/Jaspar

Match Rank:9
Score:0.48
Offset:10
Orientation:forward strand
Alignment:ARCCGGTTSSAACCGG-----
----------AACCGGAAATA
 T C G A C T A G A G T C A G T C C T A G A T C G A G C T A G C T A T G C T A C G C T G A C T G A A G T C G A T C C T A G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A T C G A T A G C T G A C A C T G A C T G C G T A G C T A T C G A A G C T C T G A

PB0077.1_Spdef_1/Jaspar

Match Rank:10
Score:0.48
Offset:-4
Orientation:reverse strand
Alignment:----ARCCGGTTSSAACCGG
AANNATCCGGATGTNN----
 A C G T A C G T A C G T A C G T T C G A C T A G A G T C A G T C C T A G A T C G A G C T A G C T A T G C T A C G C T G A C T G A A G T C G A T C C T A G A C T G
T C G A C T G A C T G A C G T A C G T A G A C T T A G C T G A C A C T G A C T G C G T A G C A T T C A G G A C T C T G A A G T C A C G T A C G T A C G T A C G T