Information for 4-AGCCAATTTT (Motif 6)

G T C A A C T G A G T C G T A C C G T A G T C A A C G T A C G T A C G T A G C T
Reverse Opposite:
C T G A C G T A G T C A G T C A A C G T A C G T A C T G A C T G A G T C A C G T
p-value:1e-12
log p-value:-2.986e+01
Information Content per bp:1.824
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.05%
Number of Background Sequences with motif86.0
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets58.4 +/- 28.2bp
Average Position of motif in Background49.3 +/- 36.0bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC/MA0161.1/Jaspar

Match Rank:1
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:AGCCAATTTT
TGCCAA----
 G T C A A C T G A G T C G T A C C G T A G T C A A C G T A C G T A C G T A G C T
G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T

YY1/MA0095.2/Jaspar

Match Rank:2
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--AGCCAATTTT
GCNGCCATCTTG
 A C G T A C G T G T C A A C T G A G T C G T A C C G T A G T C A A C G T A C G T A C G T A G C T
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--AGCCAATTTT
CGTGCCAAG---
 A C G T A C G T G T C A A C T G A G T C G T A C C G T A G T C A A C G T A C G T A C G T A G C T
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T

PB0146.1_Mafk_2/Jaspar

Match Rank:4
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---AGCCAATTTT--
CCTTGCAATTTTTNN
 A C G T A C G T A C G T G T C A A C T G A G T C G T A C C G T A G T C A A C G T A C G T A C G T A G C T A C G T A C G T
A G T C T A G C C A G T A C G T C T A G G T A C C T G A G T C A C G A T C G A T G A C T G A C T A G C T C A G T A G T C

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AGCCAATTTT
CAGCC------
 A C G T G T C A A C T G A G T C G T A C C G T A G T C A A C G T A C G T A C G T A G C T
T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T

Arid5a/MA0602.1/Jaspar

Match Rank:6
Score:0.57
Offset:2
Orientation:forward strand
Alignment:AGCCAATTTT------
--CTAATATTGCTAAA
 G T C A A C T G A G T C G T A C C G T A G T C A A C G T A C G T A C G T A G C T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PB0002.1_Arid5a_1/Jaspar

Match Rank:7
Score:0.57
Offset:2
Orientation:forward strand
Alignment:AGCCAATTTT------
--CTAATATTGCTAAA
 G T C A A C T G A G T C G T A C C G T A G T C A A C G T A C G T A C G T A G C T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

NFIA/MA0670.1/Jaspar

Match Rank:8
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--AGCCAATTTT
GGTGCCAAGT--
 A C G T A C G T G T C A A C T G A G T C G T A C C G T A G T C A A C G T A C G T A C G T A G C T
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T

E2F3/MA0469.2/Jaspar

Match Rank:9
Score:0.57
Offset:-8
Orientation:forward strand
Alignment:--------AGCCAATTTT
AAAAATGGCGCCATTTTT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A A C T G A G T C G T A C C G T A G T C A A C G T A C G T A C G T A G C T
C T G A T C G A C G T A C G T A C G T A C A G T A T C G A T C G A G T C A T C G A G T C T A G C G T C A G C A T C G A T G C A T A G C T A G C T

E2F2/MA0864.1/Jaspar

Match Rank:10
Score:0.56
Offset:-7
Orientation:reverse strand
Alignment:-------AGCCAATTTT
AAAATGGCGCCATTTT-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A A C T G A G T C G T A C C G T A G T C A A C G T A C G T A C G T A G C T
C G T A C G T A C G T A C G T A C G A T A T C G A C T G A G T C A C T G A G T C T A G C G C T A G C A T C G A T C G A T C G A T A C G T