Information for 6-HAATTCAGCATCA (Motif 3)

G C A T C G T A C T G A A C G T C G A T A G T C C G T A A C T G A G T C C G T A A C G T A T G C C G T A
Reverse Opposite:
A C G T A T C G C G T A C G A T A C T G A G T C C G A T A C T G C G T A C G T A A G C T A C G T C G T A
p-value:1e-13
log p-value:-3.055e+01
Information Content per bp:1.849
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets32.7 +/- 27.4bp
Average Position of motif in Background87.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MAFK/MA0496.1/Jaspar

Match Rank:1
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-HAATTCAGCATCA-
CTGAGTCAGCAATTT
 A C G T G C A T C G T A C T G A A C G T C G A T A G T C C G T A A C T G A G T C C G T A A C G T A T G C C G T A A C G T
G T A C G C A T C T A G C G T A T A C G A G C T G T A C C G T A A C T G A T G C G C T A C G T A G C A T G C A T G C A T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:2
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:HAATTCAGCATCA
TGAGTCAGCA---
 G C A T C G T A C T G A A C G T C G A T A G T C C G T A A C T G A G T C C G T A A C G T A T G C C G T A
G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T A C G T A C G T

MAFF/MA0495.1/Jaspar

Match Rank:3
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--HAATTCAGCATCA---
GCTGAGTCAGCAATTTTT
 A C G T A C G T G C A T C G T A C T G A A C G T C G A T A G T C C G T A A C T G A G T C C G T A A C G T A T G C C G T A A C G T A C G T A C G T
A T C G G T A C G C A T C T A G C G T A T A C G G C A T G T A C C G T A C A T G A G T C C G T A C G T A G C A T G C A T G C A T G A C T G C A T

PB0171.1_Sox18_2/Jaspar

Match Rank:4
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----HAATTCAGCATCA
NNNNTGAATTCANNNC--
 A C G T A C G T A C G T A C G T A C G T G C A T C G T A C T G A A C G T C G A T A G T C C G T A A C T G A G T C C G T A A C G T A T G C C G T A
A C T G C A T G G A T C G C T A A G C T C T A G G T C A C T G A G A C T C A G T G A T C T C G A T A C G A G C T T G A C G A T C A C G T A C G T

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.56
Offset:0
Orientation:forward strand
Alignment:HAATTCAGCATCA--
HWWGTCAGCAWWTTT
 G C A T C G T A C T G A A C G T C G A T A G T C C G T A A C T G A G T C C G T A A C G T A T G C C G T A A C G T A C G T
G T A C C G T A C G T A T A C G G C A T G T A C C G T A C A T G A G T C C G T A C G T A C G A T G C A T G C A T G A C T

PAX6(Paired,Homeobox)/Forebrain-Pax6-ChIP-Seq(GSE66961)/Homer

Match Rank:6
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:HAATTCAGCATCA---------
--TTTMCGCTTSABTGAACACN
 G C A T C G T A C T G A A C G T C G A T A G T C C G T A A C T G A G T C C G T A A C G T A T G C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G C T C A G T G A C T T G A C G A T C T C A G A T G C G C A T A G C T T A C G C T G A A T C G G A C T C T A G T G C A T C G A A G T C G C T A A T G C T C G A

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:7
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-HAATTCAGCATCA
TGAATTATGCAT--
 A C G T G C A T C G T A C T G A A C G T C G A T A G T C C G T A A C T G A G T C C G T A A C G T A T G C C G T A
C G A T C T A G G T C A G C T A C G A T G C A T G C T A C G A T C A T G G A T C G C T A C G A T A C G T A C G T

PB0042.1_Mafk_1/Jaspar

Match Rank:8
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:HAATTCAGCATCA---
-AAGTCAGCANTTTTN
 G C A T C G T A C T G A A C G T C G A T A G T C C G T A A C T G A G T C C G T A A C G T A T G C C G T A A C G T A C G T A C G T
A C G T C T G A C G T A T C A G C G A T G T A C C G T A C A T G G T A C C T G A G C A T C G A T G C A T G C A T G C A T G C T A

Mafb/MA0117.2/Jaspar

Match Rank:9
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:HAATTCAGCATCA-
--NGTCAGCANTTT
 G C A T C G T A C T G A A C G T C G A T A G T C C G T A A C T G A G T C C G T A A C G T A T G C C G T A A C G T
A C G T A C G T G T C A T A C G A G C T G T A C C T G A C A T G T A G C C T G A G C A T C G A T G C A T G C A T

PH0148.1_Pou3f3/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:forward strand
Alignment:HAATTCAGCATCA----
AAAATATGCATAATAAA
 G C A T C G T A C T G A A C G T C G A T A G T C C G T A A C T G A G T C C G T A A C G T A T G C C G T A A C G T A C G T A C G T A C G T
G C T A G C T A C T A G C G T A G A C T G C T A G A C T C A T G G T A C C T G A C G A T C G T A G C T A C A G T C T G A C G T A C G T A