Information for 4-GGCCGAGCGCAGC (Motif 6)

C T A G A T C G A T G C A T G C A T C G G T C A A C T G G T A C A C T G A G T C G C T A A T C G A G T C
Reverse Opposite:
A C T G A T G C C G A T A C T G A G T C A C T G A G T C A C G T A T G C A T C G A T C G A T G C A G T C
p-value:1e-10
log p-value:-2.448e+01
Information Content per bp:1.817
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif1.91%
Number of Background Sequences with motif103.1
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets48.7 +/- 23.4bp
Average Position of motif in Background51.7 +/- 28.1bp
Strand Bias (log2 ratio + to - strand density)1.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0044.1_Mtf1_1/Jaspar

Match Rank:1
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GGCCGAGCGCAGC--
GGGCCGTGTGCAAAAA
 A C G T C T A G A T C G A T G C A T G C A T C G G T C A A C T G G T A C A C T G A G T C G C T A A T C G A G T C A C G T A C G T
C A T G A C T G C T A G G A T C G T A C C A T G C A G T A C T G G A C T C A T G G T A C C G T A T G C A G T C A C T G A G C A T

PB0199.1_Zfp161_2/Jaspar

Match Rank:2
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GGCCGAGCGCAGC
NNGCNCTGCGCGGC
 A C G T C T A G A T C G A T G C A T G C A T C G G T C A A C T G G T A C A C T G A G T C G C T A A T C G A G T C
T C G A A G T C C A T G G A T C T G C A G A T C C A G T A C T G A G T C C T A G A T G C C T A G C T A G G T A C

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GGCCGAGCGCAGC
GAGSCCGAGC-----
 A C G T A C G T C T A G A T C G A T G C A T G C A T C G G T C A A C T G G T A C A C T G A G T C G C T A A T C G A G T C
A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C A C G T A C G T A C G T A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:4
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----GGCCGAGCGCAGC
RGKGGGCGGAGC-----
 A C G T A C G T A C G T A C G T C T A G A T C G A T G C A T G C A T C G G T C A A C T G G T A C A C T G A G T C G C T A A T C G A G T C
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T A C G T A C G T A C G T A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:5
Score:0.54
Offset:7
Orientation:forward strand
Alignment:GGCCGAGCGCAGC----
-------CGCAGCTGCG
 C T A G A T C G A T G C A T G C A T C G G T C A A C T G G T A C A C T G A G T C G C T A A T C G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G

PB0095.1_Zfp161_1/Jaspar

Match Rank:6
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GGCCGAGCGCAGC---
TGGCGCGCGCGCCTGA
 C T A G A T C G A T G C A T G C A T C G G T C A A C T G G T A C A C T G A G T C G C T A A T C G A G T C A C G T A C G T A C G T
C A G T C T A G C T A G A T G C T C A G G A T C C T A G A G T C C T A G A G T C C T A G G A T C G A T C G A C T C T A G C G T A

POL013.1_MED-1/Jaspar

Match Rank:7
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:GGCCGAGCGCAGC
--CGGAGC-----
 C T A G A T C G A T G C A T G C A T C G G T C A A C T G G T A C A C T G A G T C G C T A A T C G A G T C
A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:8
Score:0.52
Offset:4
Orientation:forward strand
Alignment:GGCCGAGCGCAGC------
----GAGCACAGCAGGACA
 C T A G A T C G A T G C A T G C A T C G G T C A A C T G G T A C A C T G A G T C G C T A A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.51
Offset:2
Orientation:forward strand
Alignment:GGCCGAGCGCAGC
--CAAAGGTCAG-
 C T A G A T C G A T G C A T G C A T C G G T C A A C T G G T A C A C T G A G T C G C T A A T C G A G T C
A C G T A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T

POL001.1_MTE/Jaspar

Match Rank:10
Score:0.51
Offset:0
Orientation:forward strand
Alignment:GGCCGAGCGCAGC------
TTTCGAGCGGAACGGTCGC
 C T A G A T C G A T G C A T G C A T C G G T C A A C T G G T A C A C T G A G T C G C T A A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G A C T A G C T A G T C C T A G C G T A C T A G A G T C A T C G T A C G C G T A C T A G A G T C A C T G A T C G C G A T G A T C T A C G A G C T