Information for 1-TCCRGTGCAGGWGGCC (Motif 2)

A C G T A G T C A G T C C T A G T A C G A C G T A C T G A G T C C T G A A C T G A C T G G C T A A C T G A C T G A T G C A G T C
Reverse Opposite:
A C T G A T C G A G T C A G T C C G A T A G T C A G T C A G C T A C T G A G T C T G C A A G T C G A C T A C T G A C T G C G T A
p-value:1e-15
log p-value:-3.651e+01
Information Content per bp:1.847
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets59.4 +/- 22.7bp
Average Position of motif in Background40.7 +/- 16.0bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:TCCRGTGCAGGWGGCC
----SDGCAGGTGCNS
 A C G T A G T C A G T C C T A G T A C G A C G T A C T G A G T C C T G A A C T G A C T G G C T A A C T G A C T G A T G C A G T C
A C G T A C G T A C G T A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:2
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:TCCRGTGCAGGWGGCC
-DCHCAGCAGGRGGCC
 A C G T A G T C A G T C C T A G T A C G A C G T A C T G A G T C C T G A A C T G A C T G G C T A A C T G A C T G A T G C A G T C
A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

ZIC1/MA0696.1/Jaspar

Match Rank:3
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:TCCRGTGCAGGWGGCC
--CACAGCGGGGGGTC
 A C G T A G T C A G T C C T A G T A C G A C G T A C T G A G T C C T G A A C T G A C T G G C T A A C T G A C T G A T G C A G T C
A C G T A C G T T G A C C T G A A G T C T G C A T C A G A G T C C T A G C A T G T C A G C A T G C A T G C A T G A G C T T G A C

ZIC4/MA0751.1/Jaspar

Match Rank:4
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TCCRGTGCAGGWGGCC
-NCNCAGCGGGGGGTC
 A C G T A G T C A G T C C T A G T A C G A C G T A C T G A G T C C T G A A C T G A C T G G C T A A C T G A C T G A T G C A G T C
A C G T C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:TCCRGTGCAGGWGGCC
-----NNCAGGTGNN-
 A C G T A G T C A G T C C T A G T A C G A C G T A C T G A G T C C T G A A C T G A C T G G C T A A C T G A C T G A T G C A G T C
A C G T A C G T A C G T A C G T A C G T C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G A C G T

ZIC3/MA0697.1/Jaspar

Match Rank:6
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TCCRGTGCAGGWGGCC
-NCGCAGCGGGGGGTC
 A C G T A G T C A G T C C T A G T A C G A C G T A C T G A G T C C T G A A C T G A C T G G C T A A C T G A C T G A T G C A G T C
A C G T C A T G G T A C C T A G G A T C T G C A T C A G A G T C C T A G A C T G A C T G C A T G C A T G C A T G A G C T T G A C

GLIS2/MA0736.1/Jaspar

Match Rank:7
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TCCRGTGCAGGWGGCC
--CTTCGCGGGGGGTC
 A C G T A G T C A G T C C T A G T A C G A C G T A C T G A G T C C T G A A C T G A C T G G C T A A C T G A C T G A T G C A G T C
A C G T A C G T T A G C C A G T G A C T G A T C T C A G G A T C C T A G C A T G A C T G C T A G C A T G C T A G A G C T T G A C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TCCRGTGCAGGWGGCC
--CACAGCAGGGGG--
 A C G T A G T C A G T C C T A G T A C G A C G T A C T G A G T C C T G A A C T G A C T G G C T A A C T G A C T G A T G C A G T C
A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----TCCRGTGCAGGWGGCC
SMCAGTCWGAKGGAGGAGGC-
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C T A G T A C G A C G T A C T G A G T C C T G A A C T G A C T G G C T A A C T G A C T G A T G C A G T C
A T C G T G A C A T G C C T G A T C A G G A C T A G T C C G A T T C A G T C G A C A T G C T A G C T A G C G T A C T A G C T A G C T G A C T A G C T A G A T G C A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:10
Score:0.55
Offset:5
Orientation:forward strand
Alignment:TCCRGTGCAGGWGGCC
-----AACAGGTGT--
 A C G T A G T C A G T C C T A G T A C G A C G T A C T G A G T C C T G A A C T G A C T G G C T A A C T G A C T G A T G C A G T C
A C G T A C G T A C G T A C G T A C G T C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T A C G T A C G T