Information for 5-CCCCTGAGCC (Motif 13)

T G A C A G T C A G T C G T A C C A G T A T C G C T G A A C T G A G T C T A G C
Reverse Opposite:
A T C G A C T G T G A C A G C T A T G C G T C A A C T G C T A G A C T G A C T G
p-value:1e-8
log p-value:-1.911e+01
Information Content per bp:1.784
Number of Target Sequences with motif78.0
Percentage of Target Sequences with motif8.75%
Number of Background Sequences with motif2076.2
Percentage of Background Sequences with motif4.30%
Average Position of motif in Targets48.2 +/- 25.3bp
Average Position of motif in Background51.0 +/- 28.4bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-CCCCTGAGCC-
TCCCCTGGGGAC
 A C G T T G A C A G T C A G T C G T A C C A G T A T C G C T G A A C T G A G T C T A G C A C G T
A G C T A G T C A G T C G A T C G A T C C G A T C T A G C T A G C T A G T C A G T G C A G T A C

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CCCCTGAGCC
ATGCCCTGAGGC
 A C G T A C G T T G A C A G T C A G T C G T A C C A G T A T C G C T G A A C T G A G T C T A G C
G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:3
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CCCCTGAGCC-
TGCCCCCGGGCA
 A C G T T G A C A G T C A G T C G T A C C A G T A T C G C T G A A C T G A G T C T A G C A C G T
G A C T T A C G T A G C A G T C A G T C A G T C T G A C T C A G T C A G A T C G A T G C C T G A

POL013.1_MED-1/Jaspar

Match Rank:4
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:CCCCTGAGCC
---CGGAGC-
 T G A C A G T C A G T C G T A C C A G T A T C G C T G A A C T G A G T C T A G C
A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T

PLAG1/MA0163.1/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CCCCTGAGCC--
CCCCCTTGGGCCCC
 A C G T A C G T T G A C A G T C A G T C G T A C C A G T A T C G C T G A A C T G A G T C T A G C A C G T A C G T
A G T C G T A C A G T C A G T C G A T C A C G T C G A T C A T G T C A G A T C G G T A C A G T C G A T C A G T C

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:6
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CCCCTGAGCC
TGACCTTGACCT
 A C G T A C G T T G A C A G T C A G T C G T A C C A G T A T C G C T G A A C T G A G T C T A G C
G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CCCCTGAGCC
WDNCTGGGCA
 T G A C A G T C A G T C G T A C C A G T A T C G C T G A A C T G A G T C T A G C
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:8
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CCCCTGAGCC
TGACCTTGACCT
 A C G T A C G T T G A C A G T C A G T C G T A C C A G T A T C G C T G A A C T G A G T C T A G C
G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T

TFAP2B/MA0811.1/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CCCCTGAGCC
TGCCCCAGGGCA
 A C G T A C G T T G A C A G T C A G T C G T A C C A G T A T C G C T G A A C T G A G T C T A G C
G A C T T A C G A T G C G A T C A G T C A G T C T C G A T C A G T C A G T A C G A T G C C T G A

INSM1/MA0155.1/Jaspar

Match Rank:10
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CCCCTGAGCC
CGCCCCCTGACA-
 A C G T A C G T A C G T T G A C A G T C A G T C G T A C C A G T A T C G C T G A A C T G A G T C T A G C
G A T C C T A G T G A C A G T C A G T C A T G C A G T C C G A T C A T G T C G A G T A C G T C A A C G T