p-value: | 1e-8 |
log p-value: | -2.060e+01 |
Information Content per bp: | 1.846 |
Number of Target Sequences with motif | 12.0 |
Percentage of Target Sequences with motif | 1.35% |
Number of Background Sequences with motif | 56.4 |
Percentage of Background Sequences with motif | 0.12% |
Average Position of motif in Targets | 62.3 +/- 25.3bp |
Average Position of motif in Background | 60.8 +/- 31.0bp |
Strand Bias (log2 ratio + to - strand density) | -0.5 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer
Match Rank: | 1 |
Score: | 0.66 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | CATCATGGCA- ---CTTGGCAA |
|
|
|
NFIA/MA0670.1/Jaspar
Match Rank: | 2 |
Score: | 0.64 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | CATCATGGCA-- --NNTTGGCANN |
|
|
|
NFIX/MA0671.1/Jaspar
Match Rank: | 3 |
Score: | 0.62 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | CATCATGGCA-- ---NTTGGCANN |
|
|
|
THAP1/MA0597.1/Jaspar
Match Rank: | 4 |
Score: | 0.61 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | CATCATGGCA- --TNNGGGCAG |
|
|
|
PB0055.1_Rfx4_1/Jaspar
Match Rank: | 5 |
Score: | 0.60 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CATCATGGCA----- TACCATAGCAACGGT |
|
|
|
NFIC/MA0161.1/Jaspar
Match Rank: | 6 |
Score: | 0.60 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | CATCATGGCA ----TTGGCA |
|
|
|
YY1/MA0095.2/Jaspar
Match Rank: | 7 |
Score: | 0.60 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CATCATGGCA-- CAAGATGGCGGC |
|
|
|
Rfx1/MA0509.1/Jaspar
Match Rank: | 8 |
Score: | 0.59 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --CATCATGGCA-- GTTGCCATGGCAAC |
|
|
|
Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer
Match Rank: | 9 |
Score: | 0.59 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----CATCATGGCA ATTGCATCAT---- |
|
|
|
Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer
Match Rank: | 10 |
Score: | 0.59 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----CATCATGGCA ATTGCATCAK---- |
|
|
|