Information for 3-CTGCCCTCTTGBCSGA (Motif 8)

A G T C A G C T A C T G A G T C A G T C T G A C A C G T A T G C A G C T A C G T A C T G A T C G T A G C A T G C T A C G G C T A
Reverse Opposite:
C G A T A T G C T A C G A T C G T A G C G T A C T G C A T C G A A T C G C G T A A C T G C T A G C T A G G T A C C T G A A C T G
p-value:1e-11
log p-value:-2.534e+01
Information Content per bp:1.717
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.46%
Number of Background Sequences with motif53.0
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets31.4 +/- 25.0bp
Average Position of motif in Background56.7 +/- 26.4bp
Strand Bias (log2 ratio + to - strand density)-1.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1(Zf)/Promoter/Homer

Match Rank:1
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-CTGCCCTCTTGBCSGA
GCCGCCATCTTG-----
 A C G T A G T C A G C T A C T G A G T C A G T C T G A C A C G T A T G C A G C T A C G T A C T G A T C G T A G C A T G C T A C G G C T A
C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G A C G T A C G T A C G T A C G T A C G T

YY1/MA0095.2/Jaspar

Match Rank:2
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CTGCCCTCTTGBCSGA
GCNGCCATCTTG-----
 A C G T A G T C A G C T A C T G A G T C A G T C T G A C A C G T A T G C A G C T A C G T A C T G A T C G T A G C A T G C T A C G G C T A
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G A C G T A C G T A C G T A C G T A C G T

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CTGCCCTCTTGBCSGA
-TGCCCTGAGGGCA--
 A G T C A G C T A C T G A G T C A G T C T G A C A C G T A T G C A G C T A C G T A C T G A T C G T A G C A T G C T A C G G C T A
A C G T G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:4
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CTGCCCTCTTGBCSGA
-TGCCCTGAGGGCA--
 A G T C A G C T A C T G A G T C A G T C T G A C A C G T A T G C A G C T A C G T A C T G A T C G T A G C A T G C T A C G G C T A
A C G T G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CTGCCCTCTTGBCSGA
-TGCCCTGAGGGCA--
 A G T C A G C T A C T G A G T C A G T C T G A C A C G T A T G C A G C T A C G T A C T G A T C G T A G C A T G C T A C G G C T A
A C G T G C A T A T C G A G T C A G T C A G T C A G C T A C T G T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CTGCCCTCTTGBCSGA
CTGCCCGCA-------
 A G T C A G C T A C T G A G T C A G T C T G A C A C G T A T G C A G C T A C G T A C T G A T C G T A G C A T G C T A C G G C T A
A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CTGCCCTCTTGBCSGA
ATGCCCTGAGGC----
 A G T C A G C T A C T G A G T C A G T C T G A C A C G T A T G C A G C T A C G T A C T G A T C G T A G C A T G C T A C G G C T A
G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C A C G T A C G T A C G T A C G T

Nr2f6(var.2)/MA0728.1/Jaspar

Match Rank:8
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CTGCCCTCTTGBCSGA
-TGACCTTTTGACCTC
 A G T C A G C T A C T G A G T C A G T C T G A C A C G T A T G C A G C T A C G T A C T G A T C G T A G C A T G C T A C G G C T A
A C G T A G C T C T A G C G T A G T A C A G T C A C G T G A C T G C A T C A G T T C A G G T C A A G T C A G T C G A C T A G T C

PB0076.1_Sp4_1/Jaspar

Match Rank:9
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----CTGCCCTCTTGBCSGA
GGTCCCGCCCCCTTCTC---
 A C G T A C G T A C G T A C G T A G T C A G C T A C T G A G T C A G T C T G A C A C G T A T G C A G C T A C G T A C T G A T C G T A G C A T G C T A C G G C T A
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C A C G T A C G T A C G T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CTGCCCTCTTGBCSGA
NTGCCCANNGGTNA--
 A G T C A G C T A C T G A G T C A G T C T G A C A C G T A T G C A G C T A C G T A C T G A T C G T A G C A T G C T A C G G C T A
T G A C G C A T T C A G G T A C G A T C A G T C C G T A T A C G T C G A C T A G T C A G G A C T C A T G C T G A A C G T A C G T