Information for 1-TTCCAGTCTAGACWDK (Motif 2)

A G C T A G C T T G A C G A T C G C T A A T C G A C G T A G T C A C G T C G T A A C T G C G T A A T G C C G T A C T A G C A T G
Reverse Opposite:
G T A C G A T C G C A T A T C G A C G T A G T C A C G T C G T A A C T G C G T A A T G C C G A T C T A G A C T G T C G A T C G A
p-value:1e-26
log p-value:-6.026e+01
Information Content per bp:1.701
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.13%
Number of Background Sequences with motif18.7
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets56.0 +/- 19.0bp
Average Position of motif in Background48.7 +/- 25.3bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SMAD3/MA0795.1/Jaspar

Match Rank:1
Score:0.92
Offset:4
Orientation:forward strand
Alignment:TTCCAGTCTAGACWDK
----CGTCTAGACA--
 A G C T A G C T T G A C G A T C G C T A A T C G A C G T A G T C A C G T C G T A A C T G C G T A A T G C C G T A C T A G C A T G
A C G T A C G T A C G T A C G T G A T C C T A G C G A T T A G C A G C T T G C A A T C G G T C A G A T C G C T A A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:2
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TTCCAGTCTAGACWDK
NNTNNTGTCTGGNNTNG
 A C G T A G C T A G C T T G A C G A T C G C T A A T C G A C G T A G T C A C G T C G T A A C T G C G T A A T G C C G T A C T A G C A T G
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.65
Offset:3
Orientation:forward strand
Alignment:TTCCAGTCTAGACWDK
---CTGTCTGG-----
 A G C T A G C T T G A C G A T C G C T A A T C G A C G T A G T C A C G T C G T A A C T G C G T A A T G C C G T A C T A G C A T G
A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:4
Score:0.64
Offset:7
Orientation:reverse strand
Alignment:TTCCAGTCTAGACWDK
-------BCAGACWA-
 A G C T A G C T T G A C G A T C G C T A A T C G A C G T A G T C A C G T C G T A A C T G C G T A A T G C C G T A C T A G C A T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TTCCAGTCTAGACWDK
-VBSYGTCTGG-----
 A G C T A G C T T G A C G A T C G C T A A T C G A C G T A G T C A C G T C G T A A C T G C G T A A T G C C G T A C T A G C A T G
A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T

TP73/MA0861.1/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TTCCAGTCTAGACWDK--
GACATGTCNNGACATGTN
 A G C T A G C T T G A C G A T C G C T A A T C G A C G T A G T C A C G T C G T A A C T G C G T A A T G C C G T A C T A G C A T G A C G T A C G T
C A T G C T G A T A G C C T G A G C A T A C T G G A C T G A T C G A T C T C G A C T A G C T G A A T G C G C T A G A C T A C T G A G C T G T A C

PB0090.1_Zbtb12_1/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TTCCAGTCTAGACWDK
CTAAGGTTCTAGATCAC
 A C G T A G C T A G C T T G A C G A T C G C T A A T C G A C G T A G T C A C G T C G T A A C T G C G T A A T G C C G T A C T A G C A T G
A T G C A C G T G C T A T C G A A C T G C T A G C G A T C G A T A G T C A G C T T C G A C T A G T C G A G C A T A G T C T G C A A G T C

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TTCCAGTCTAGACWDK
BCNGGTTCTAGANCN-
 A G C T A G C T T G A C G A T C G C T A A T C G A C G T A G T C A C G T C G T A A C T G C G T A A T G C C G T A C T A G C A T G
A G C T T G A C C T A G C A T G C T A G G A C T A C G T A G T C A G C T C T G A T A C G T C G A C G A T A G T C G A C T A C G T

p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer

Match Rank:9
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TTCCAGTCTAGACWDK--
NGGGCATGTCTGGGCATGTT
 A C G T A C G T A G C T A G C T T G A C G A T C G C T A A T C G A C G T A G T C A C G T C G T A A C T G C G T A A T G C C G T A C T A G C A T G A C G T A C G T
G T C A C T A G C T A G C T G A A G T C G C T A C G A T A C T G G A C T G A T C G A C T C T A G C T A G C T G A T G A C G C T A C G A T T C A G G A C T G A T C

p53(p53)/Saos-p53-ChIP-Seq/Homer

Match Rank:10
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TTCCAGTCTAGACWDK--
NGGGCATGTCTGGGCATGTT
 A C G T A C G T A G C T A G C T T G A C G A T C G C T A A T C G A C G T A G T C A C G T C G T A A C T G C G T A A T G C C G T A C T A G C A T G A C G T A C G T
G T C A C T A G C T A G C T G A A G T C G C T A C G A T A C T G G A C T G A T C G A C T C T A G C T A G C T G A T G A C G C T A C G A T T C A G G A C T G A T C