Information for 4-TAAAAGYGYCWKC (Motif 5)

A C G T C G T A C G T A C G T A C G T A C T A G A G C T A C T G A G C T A G T C C G T A A C T G A T G C
Reverse Opposite:
A T C G G T A C C G A T A C T G C T G A G T A C C T G A A G T C A C G T A C G T A C G T A C G T C G T A
p-value:1e-16
log p-value:-3.817e+01
Information Content per bp:1.869
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.10%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.2 +/- 22.6bp
Average Position of motif in Background92.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TATA-Box(TBP)/Promoter/Homer

Match Rank:1
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----TAAAAGYGYCWKC
GNCTATAAAAGG------
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A C G T A C T A G A G C T A C T G A G C T A G T C C G T A A C T G A T G C
A T C G A T C G A T G C A G C T G C T A A C G T C G T A C G T A C T G A C T G A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:2
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----TAAAAGYGYCWKC
NCYAATAAAA--------
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A C G T A C T A G A G C T A C T G A G C T A G T C C G T A A C T G A T G C
C G A T T A G C G A C T G T C A C G T A A C G T C G T A C G T A C G T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:3
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----TAAAAGYGYCWKC
CCYMATAAAA--------
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A C G T A C T A G A G C T A C T G A G C T A G T C C G T A A C T G A T G C
T G A C A T G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TAAAAGYGYCWKC---
-AGAAATGACTTCCCT
 A C G T C G T A C G T A C G T A C G T A C T A G A G C T A C T G A G C T A G T C C G T A A C T G A T G C A C G T A C G T A C G T
A C G T C T G A C T A G T G C A C T G A T C G A A G C T C A T G T C G A A G T C G A C T A C G T A G T C G A T C G A T C G A C T

PH0078.1_Hoxd13/Jaspar

Match Rank:5
Score:0.56
Offset:-7
Orientation:forward strand
Alignment:-------TAAAAGYGYCWKC
CTACCAATAAAATTCT----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A C G T A C T A G A G C T A C T G A G C T A G T C C G T A A C T G A T G C
G T A C C G A T G C T A A G T C G A T C G C T A C G T A A G C T C G T A C G T A C G T A G C T A G A C T G A C T G T A C G A C T A C G T A C G T A C G T A C G T

POL012.1_TATA-Box/Jaspar

Match Rank:6
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---TAAAAGYGYCWKC
GTATAAAAGGCGGGG-
 A C G T A C G T A C G T A C G T C G T A C G T A C G T A C G T A C T A G A G C T A C T G A G C T A G T C C G T A A C T G A T G C
T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G A C G T

TBP/MA0108.2/Jaspar

Match Rank:7
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---TAAAAGYGYCWKC
GTATAAAAGGCGGGG-
 A C G T A C G T A C G T A C G T C G T A C G T A C G T A C G T A C T A G A G C T A C T G A G C T A G T C C G T A A C T G A T G C
T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G A C G T

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:8
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----TAAAAGYGYCWKC
NGYCATAAAWCH------
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A C G T A C T A G A G C T A C T G A G C T A G T C C G T A A C T G A T G C
T A C G T C A G G A T C G T A C T C G A G A C T G C T A G C T A G C T A C G T A G A T C G T C A A C G T A C G T A C G T A C G T A C G T A C G T

HOXD13/MA0909.1/Jaspar

Match Rank:9
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----TAAAAGYGYCWKC
CCAATAAAAA-------
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A C G T A C T A G A G C T A C T G A G C T A G T C C G T A A C T G A T G C
A T G C G A T C G T C A C G T A A G C T C G T A G C T A G T C A G T C A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0146.1_Mafk_2/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--TAAAAGYGYCWKC
GAAAAAATTGCAAGG
 A C G T A C G T A C G T C G T A C G T A C G T A C G T A C T A G A G C T A C T G A G C T A G T C C G T A A C T G A T G C
T C A G G T C A T C G A C T G A C T G A G C T A G C T A C A G T A G C T C A T G A G T C T G C A G T C A A T C G T C A G