Information for 20-TAGAAGCCAGACG (Motif 25)

A G C T C G T A A C T G C G T A C G T A A C T G A G T C A G T C C G T A A C T G G T C A A G T C C T A G
Reverse Opposite:
A G T C A C T G A C G T A G T C A C G T A C T G A C T G A G T C C G A T A C G T A G T C A C G T C T G A
p-value:1e-9
log p-value:-2.202e+01
Information Content per bp:1.928
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.8 +/- 16.2bp
Average Position of motif in Background44.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:1
Score:0.75
Offset:3
Orientation:reverse strand
Alignment:TAGAAGCCAGACG
---ATGCCAGACN
 A G C T C G T A A C T G C G T A C G T A A C T G A G T C A G T C C G T A A C T G G T C A A G T C C T A G
A C G T A C G T A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

PB0060.1_Smad3_1/Jaspar

Match Rank:2
Score:0.71
Offset:1
Orientation:forward strand
Alignment:TAGAAGCCAGACG-----
-CAAATCCAGACATCACA
 A G C T C G T A A C T G C G T A C G T A A C T G A G T C A G T C C G T A A C T G G T C A A G T C C T A G A C G T A C G T A C G T A C G T A C G T
A C G T G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.68
Offset:6
Orientation:reverse strand
Alignment:TAGAAGCCAGACG---
------CCAGACRSVB
 A G C T C G T A A C T G C G T A C G T A A C T G A G T C A G T C C G T A A C T G G T C A A G T C C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.68
Offset:6
Orientation:reverse strand
Alignment:TAGAAGCCAGACG-
------CCAGACAG
 A G C T C G T A A C T G C G T A C G T A A C T G A G T C A G T C C G T A A C T G G T C A A G T C C T A G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:5
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:TAGAAGCCAGACG-
-AGGTGNCAGACAG
 A G C T C G T A A C T G C G T A C G T A A C T G A G T C A G T C C G T A A C T G G T C A A G T C C T A G A C G T
A C G T C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.64
Offset:1
Orientation:forward strand
Alignment:TAGAAGCCAGACG
-AGGTGHCAGACA
 A G C T C G T A A C T G C G T A C G T A A C T G A G T C A G T C C G T A A C T G G T C A A G T C C T A G
A C G T C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:7
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---TAGAAGCCAGACG
TGACANARRCCAGRC-
 A C G T A C G T A C G T A G C T C G T A A C T G C G T A C G T A A C T G A G T C A G T C C G T A A C T G G T C A A G T C C T A G
C G A T C T A G C T G A A T G C C T G A T C G A C G T A C T G A T C G A T A G C A G T C C G T A A C T G T C G A A T G C A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:8
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:TAGAAGCCAGACG-
------BCAGACWA
 A G C T C G T A A C T G C G T A C G T A A C T G A G T C A G T C C G T A A C T G G T C A A G T C C T A G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

POL008.1_DCE_S_I/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TAGAAGCCAGACG
-NGAAGC------
 A G C T C G T A A C T G C G T A C G T A A C T G A G T C A G T C C G T A A C T G G T C A A G T C C T A G
A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:10
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:TAGAAGCCAGACG
----TGCCAA---
 A G C T C G T A A C T G C G T A C G T A A C T G A G T C A G T C C G T A A C T G G T C A A G T C C T A G
A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T