Information for 18-YTGTCTAGACRRG (Motif 23)

A G T C G C A T A C T G A C G T A G T C A G C T G T C A A T C G C G T A T A G C C T A G C T A G A T C G
Reverse Opposite:
T A G C A G T C G A T C A T C G A C G T T A G C A C G T C T G A C T A G C G T A G T A C C G T A T C A G
p-value:1e-9
log p-value:-2.202e+01
Information Content per bp:1.768
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.7 +/- 26.4bp
Average Position of motif in Background15.3 +/- 3.8bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SMAD3/MA0795.1/Jaspar

Match Rank:1
Score:0.94
Offset:1
Orientation:reverse strand
Alignment:YTGTCTAGACRRG
-TGTCTAGACG--
 A G T C G C A T A C T G A C G T A G T C A G C T G T C A A T C G C G T A T A G C C T A G C T A G A T C G
A C G T C G A T C A T G C A G T T A G C A C G T T C G A A T C G G C T A G A T C C T A G A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:2
Score:0.66
Offset:0
Orientation:forward strand
Alignment:YTGTCTAGACRRG
TWGTCTGV-----
 A G T C G C A T A C T G A C G T A G T C A G C T G T C A A T C G C G T A T A G C C T A G C T A G A T C G
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:3
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----YTGTCTAGACRRG
NNTNNTGTCTGGNNTNG
 A C G T A C G T A C G T A C G T A G T C G C A T A C T G A C G T A G T C A G C T G T C A A T C G C G T A T A G C C T A G C T A G A T C G
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:YTGTCTAGACRRG
----CCAGACAG-
 A G T C G C A T A C T G A C G T A G T C A G C T G T C A A T C G C G T A T A G C C T A G C T A G A T C G
A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:YTGTCTAGACRRG-
----CCAGACRSVB
 A G T C G C A T A C T G A C G T A G T C A G C T G T C A A T C G C G T A T A G C C T A G C T A G A T C G A C G T
A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

PB0090.1_Zbtb12_1/Jaspar

Match Rank:6
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----YTGTCTAGACRRG
CTAAGGTTCTAGATCAC
 A C G T A C G T A C G T A C G T A G T C G C A T A C T G A C G T A G T C A G C T G T C A A T C G C G T A T A G C C T A G C T A G A T C G
A T G C A C G T G C T A T C G A A C T G C T A G C G A T C G A T A G T C A G C T T C G A C T A G T C G A G C A T A G T C T G C A A G T C

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---YTGTCTAGACRRG
BCNGGTTCTAGANCN-
 A C G T A C G T A C G T A G T C G C A T A C T G A C G T A G T C A G C T G T C A A T C G C G T A T A G C C T A G C T A G A T C G
A G C T T G A C C T A G C A T G C T A G G A C T A C G T A G T C A G C T C T G A T A C G T C G A C G A T A G T C G A C T A C G T

HSF2/MA0770.1/Jaspar

Match Rank:8
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---YTGTCTAGACRRG
GAANGTTCTAGAA---
 A C G T A C G T A C G T A G T C G C A T A C T G A C G T A G T C A G C T G T C A A T C G C G T A T A G C C T A G C T A G A T C G
T C A G C T G A G C T A G A T C T C A G G C A T C A G T G A T C A G C T T C G A A C T G G T C A G C T A A C G T A C G T A C G T

TP73/MA0861.1/Jaspar

Match Rank:9
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---YTGTCTAGACRRG--
GACATGTCNNGACATGTN
 A C G T A C G T A C G T A G T C G C A T A C T G A C G T A G T C A G C T G T C A A T C G C G T A T A G C C T A G C T A G A T C G A C G T A C G T
C A T G C T G A T A G C C T G A G C A T A C T G G A C T G A T C G A T C T C G A C T A G C T G A A T G C G C T A G A C T A C T G A G C T G T A C

Bcl6/MA0463.1/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:forward strand
Alignment:YTGTCTAGACRRG-
TTTCCTAGAAAGCA
 A G T C G C A T A C T G A C G T A G T C A G C T G T C A A T C G C G T A T A G C C T A G C T A G A T C G A C G T
C A G T C G A T A G C T G T A C A G T C A C G T T C G A C T A G C T G A T C G A C T G A C A T G G T A C G C T A