Information for 22-AGTTAAATATTAACAG (Motif 47)

C G T A A C T G A C G T A C G T C G T A C G T A C G T A A C G T C G T A A C G T A C G T C G T A C G T A A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G A C G T A C G T C G T A C G T A A C G T C G T A A C G T A C G T A C G T C G T A C G T A A G T C A C G T
p-value:1e-3
log p-value:-7.024e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif2.50%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets24.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:1
Score:0.78
Offset:0
Orientation:forward strand
Alignment:AGTTAAATATTAACAG
GGTTAAACATTAA---
 C G T A A C T G A C G T A C G T C G T A C G T A C G T A A C G T C G T A A C G T A C G T C G T A C G T A A G T C C G T A A C T G
C T A G C T A G G C A T C G A T C T G A G T C A G C T A A T G C C G T A C A G T G A C T C G T A T G C A A C G T A C G T A C G T

HNF1A/MA0046.2/Jaspar

Match Rank:2
Score:0.75
Offset:0
Orientation:forward strand
Alignment:AGTTAAATATTAACAG
AGTTAATGATTAACT-
 C G T A A C T G A C G T A C G T C G T A C G T A C G T A A C G T C G T A A C G T A C G T C G T A C G T A A G T C C G T A A C T G
C T G A C T A G A G C T G C A T C T G A G T C A G C A T T A C G C G T A C A G T G A C T C G T A T C G A G T A C G C A T A C G T

HNF1B/MA0153.2/Jaspar

Match Rank:3
Score:0.73
Offset:1
Orientation:forward strand
Alignment:AGTTAAATATTAACAG
-GTTAATGATTAAC--
 C G T A A C T G A C G T A C G T C G T A C G T A C G T A A C G T C G T A A C G T A C G T C G T A C G T A A G T C C G T A A C T G
A C G T C A T G A G C T G C A T C T G A G T C A G C A T T A C G C G T A C A G T G A C T C T G A T C G A G A T C A C G T A C G T

HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer

Match Rank:4
Score:0.71
Offset:1
Orientation:forward strand
Alignment:AGTTAAATATTAACAG
-GTTAATNATTAA---
 C G T A A C T G A C G T A C G T C G T A C G T A C G T A A C G T C G T A A C G T A C G T C G T A C G T A A G T C C G T A A C T G
A C G T C T A G A C G T G C A T T C G A G T C A G C A T A T C G C G T A C A G T A G C T C T G A T G C A A C G T A C G T A C G T

PH0051.1_Hoxa4/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--AGTTAAATATTAACAG
CNAGTTAATTAATAANN-
 A C G T A C G T C G T A A C T G A C G T A C G T C G T A C G T A C G T A A C G T C G T A A C G T A C G T C G T A C G T A A G T C C G T A A C T G
T G A C T C G A G T C A T C A G G C A T G A C T G T C A C G T A G A C T A C G T C T G A C G T A A G C T C T G A C T G A G A C T G A T C A C G T

PH0018.1_Dbx1/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AGTTAAATATTAACAG
TAATTAATTAATAATTA
 A C G T C G T A A C T G A C G T A C G T C G T A C G T A C G T A A C G T C G T A A C G T A C G T C G T A C G T A A G T C C G T A A C T G
G A C T G C T A C T G A G C A T G C A T G C T A C G T A G C A T G C A T C G T A G C T A G C A T C G T A T C G A C G A T C G A T C T G A

PB0109.1_Bbx_2/Jaspar

Match Rank:7
Score:0.59
Offset:3
Orientation:forward strand
Alignment:AGTTAAATATTAACAG----
---TGATTGTTAACAGTTGG
 C G T A A C T G A C G T A C G T C G T A C G T A C G T A A C G T C G T A A C G T A C G T C G T A C G T A A G T C C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A C T T C A G G C T A G A C T A C G T C A T G C A G T A G C T T C G A G T C A G T A C T C G A A T C G G C A T A C G T C T A G T C A G

Arid5a/MA0602.1/Jaspar

Match Rank:8
Score:0.59
Offset:3
Orientation:forward strand
Alignment:AGTTAAATATTAACAG-
---CTAATATTGCTAAA
 C G T A A C T G A C G T A C G T C G T A C G T A C G T A A C G T C G T A A C G T A C G T C G T A C G T A A G T C C G T A A C T G A C G T
A C G T A C G T A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PB0002.1_Arid5a_1/Jaspar

Match Rank:9
Score:0.59
Offset:3
Orientation:forward strand
Alignment:AGTTAAATATTAACAG-
---CTAATATTGCTAAA
 C G T A A C T G A C G T A C G T C G T A C G T A C G T A A C G T C G T A A C G T A C G T C G T A C G T A A G T C C G T A A C T G A C G T
A C G T A C G T A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PH0070.1_Hoxc5/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--AGTTAAATATTAACAG
CGAATTAATTAATTACT-
 A C G T A C G T C G T A A C T G A C G T A C G T C G T A C G T A C G T A A C G T C G T A A C G T A C G T C G T A C G T A A G T C C G T A A C T G
T A G C T A C G G T C A T C G A A G C T G A C T G T C A C G T A G C A T C A G T C T G A T C G A A G C T G C A T T G C A G A C T G C A T A C G T