Information for 15-GTGTGAGAGAGAG (Motif 40)

A C T G C G A T A C T G C G A T A C T G C G T A A T C G C G T A A C T G C G T A C T A G C G T A T C A G
Reverse Opposite:
A G T C A C G T A G T C A C G T A G T C A C G T A T G C A C G T A G T C C G T A A G T C C G T A A G T C
p-value:1e-3
log p-value:-7.024e+00
Information Content per bp:1.922
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif2.50%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets73.0 +/- 0.0bp
Average Position of motif in Background18.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:1
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GTGTGAGAGAGAG
AGGTGNCAGACAG
 A C T G C G A T A C T G C G A T A C T G C G T A A T C G C G T A A C T G C G T A C T A G C G T A T C A G
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G

MGA/MA0801.1/Jaspar

Match Rank:2
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GTGTGAGAGAGAG
AGGTGTGA-------
 A C G T A C G T A C T G C G A T A C T G C G A T A C T G C G T A A T C G C G T A A C T G C G T A C T A G C G T A T C A G
C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TBX1/MA0805.1/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GTGTGAGAGAGAG
AGGTGTGA-------
 A C G T A C G T A C T G C G A T A C T G C G A T A C T G C G T A A T C G C G T A A C T G C G T A C T A G C G T A T C A G
C T G A T C A G A C T G A G C T A T C G G A C T A C T G T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TBX2/MA0688.1/Jaspar

Match Rank:4
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GTGTGAGAGAGAG
AAGGTGTGAAA-----
 A C G T A C G T A C G T A C T G C G A T A C T G C G A T A C T G C G T A A T C G C G T A A C T G C G T A C T A G C G T A T C A G
C G T A C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A C G T A C G T A A C G T A C G T A C G T A C G T A C G T

TBR1/MA0802.1/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GTGTGAGAGAGAG
AGGTGTGAAA-----
 A C G T A C G T A C T G C G A T A C T G C G A T A C T G C G T A A T C G C G T A A C T G C G T A C T A G C G T A T C A G
C T G A C T A G A T C G A G C T A T C G G A C T A C T G C T G A G C T A G C T A A C G T A C G T A C G T A C G T A C G T

TBX15/MA0803.1/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GTGTGAGAGAGAG
AGGTGTGA-------
 A C G T A C G T A C T G C G A T A C T G C G A T A C T G C G T A A T C G C G T A A C T G C G T A C T A G C G T A T C A G
C T G A C T A G T C A G A C G T A T C G A G C T A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GTGTGAGAGAGAG
AGGTGHCAGACA-
 A C T G C G A T A C T G C G A T A C T G C G T A A T C G C G T A A C T G C G T A C T A G C G T A T C A G
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A A C G T

TBX4/MA0806.1/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GTGTGAGAGAGAG
AGGTGTGA-------
 A C G T A C G T A C T G C G A T A C T G C G A T A C T G C G T A A T C G C G T A A C T G C G T A C T A G C G T A T C A G
C T G A T C A G T A C G A G C T A C T G G A C T A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:9
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GTGTGAGAGAGAG--
---TGAGTGACAGSC
 A C T G C G A T A C T G C G A T A C T G C G T A A T C G C G T A A C T G C G T A C T A G C G T A T C A G A C G T A C G T
A C G T A C G T A C G T C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C

EOMES/MA0800.1/Jaspar

Match Rank:10
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GTGTGAGAGAGAG
AAGGTGTGAAAAT---
 A C G T A C G T A C G T A C T G C G A T A C T G C G A T A C T G C G T A A T C G C G T A A C T G C G T A C T A G C G T A T C A G
C T G A C T G A C T A G A C T G A G C T T C A G G A C T A C T G T C G A G C T A G T C A C G T A G A C T A C G T A C G T A C G T