Information for 10-CAATCAATCG (Motif 33)

A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T A G T C A C T G
Reverse Opposite:
A G T C A C T G C G T A A C G T A C G T A C T G C G T A A C G T A C G T A C T G
p-value:1e-3
log p-value:-7.024e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif2.50%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets73.0 +/- 0.0bp
Average Position of motif in Background71.5 +/- 3.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Dux/MA0611.1/Jaspar

Match Rank:1
Score:0.80
Offset:-1
Orientation:forward strand
Alignment:-CAATCAATCG
CCAATCAA---
 A C G T A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T A G T C A C T G
A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:2
Score:0.80
Offset:-2
Orientation:forward strand
Alignment:--CAATCAATCG
HNRAATCAAT--
 A C G T A C G T A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T A G T C A C T G
G C T A A C T G T C G A C T G A C T G A A C G T T A G C C T G A C G T A C G A T A C G T A C G T

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:3
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--CAATCAATCG----
GAAGATCAATCACTAA
 A C G T A C G T A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T A G T C A C T G A C G T A C G T A C G T A C G T
T A C G C T A G T C G A T A C G G C T A G C A T A G T C C G T A C T G A C A G T G A T C C T G A A T G C A C G T G C T A C G T A

PH0026.1_Duxbl/Jaspar

Match Rank:4
Score:0.74
Offset:-5
Orientation:forward strand
Alignment:-----CAATCAATCG--
CGACCCAATCAACGGTG
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T A G T C A C T G A C G T A C G T
A G T C C T A G C T G A A G T C A G T C A G T C G T C A G T C A A G C T A G T C C G T A C T G A A G T C T A C G T C A G G C A T T A C G

PB0144.1_Lef1_2/Jaspar

Match Rank:5
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--CAATCAATCG----
GAAGATCAATCACTTA
 A C G T A C G T A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T A G T C A C T G A C G T A C G T A C G T A C G T
T A C G C G T A T C G A T A C G G C T A C G A T A G T C C G T A C T G A C A G T G A T C C T G A G T A C A G C T G C A T C G T A

PBX1/MA0070.1/Jaspar

Match Rank:6
Score:0.73
Offset:-4
Orientation:forward strand
Alignment:----CAATCAATCG
CCATCAATCAAA--
 A C G T A C G T A C G T A C G T A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T A G T C A C T G
G A T C A G T C T C G A G A C T A G T C G T C A C G T A A C G T A G T C G C T A C G T A C G T A A C G T A C G T

Hoxa9/MA0594.1/Jaspar

Match Rank:7
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-CAATCAATCG
GCCATAAATCA
 A C G T A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T A G T C A C T G
T A C G G A T C G T A C T C G A A C G T T G C A G C T A G T C A C G A T G A T C G C T A

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:8
Score:0.70
Offset:0
Orientation:forward strand
Alignment:CAATCAATCG
TCATCAATCA
 A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T A G T C A C T G
G A C T G T A C T G C A A C G T G A T C G C T A T C G A A C G T A G T C C G T A

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:9
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-CAATCAATCG-
GYCATCMATCAT
 A C G T A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T A G T C A C T G A C G T
T A C G G A C T T G A C C G T A A C G T G A T C G T C A C G T A A C G T A T G C C G T A G A C T

HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer

Match Rank:10
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CAATCAATCG
GGCCATAAATCA
 A C G T A C G T A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T A G T C A C T G
C T A G T A C G A G T C G T A C T C G A A C G T G T C A G C T A G C T A C G A T A G T C G C T A