Information for 6-GCGCTGTGCAGCT (Motif 9)

A T C G A G T C A C T G A G T C A C G T A C T G A C G T A C T G A G T C C G T A A C T G A G T C A C G T
Reverse Opposite:
T C G A A C T G A G T C A C G T A C T G A G T C C G T A A G T C G T C A A C T G A G T C A C T G A T G C
p-value:1e-9
log p-value:-2.290e+01
Information Content per bp:1.914
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.0 +/- 24.1bp
Average Position of motif in Background25.9 +/- 13.7bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GCGCTGTGCAGCT
--GCTGTG-----
 A T C G A G T C A C T G A G T C A C G T A C T G A C G T A C T G A G T C C G T A A C T G A G T C A C G T
A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T

PB0199.1_Zfp161_2/Jaspar

Match Rank:2
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GCGCTGTGCAGCT
GCCGCGCAGTGCGT--
 A C G T A C G T A C G T A T C G A G T C A C T G A G T C A C G T A C T G A C G T A C T G A G T C C G T A A C T G A G T C A C G T
C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T A C G T A C G T

Rhox11/MA0629.1/Jaspar

Match Rank:3
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---GCGCTGTGCAGCT-
AAGACGCTGTAAAGCGA
 A C G T A C G T A C G T A T C G A G T C A C T G A G T C A C G T A C T G A C G T A C T G A G T C C G T A A C T G A G T C A C G T A C G T
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

PH0157.1_Rhox11_1/Jaspar

Match Rank:4
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---GCGCTGTGCAGCT-
AAGACGCTGTAAAGCGA
 A C G T A C G T A C G T A T C G A G T C A C T G A G T C A C G T A C T G A C G T A C T G A G T C C G T A A C T G A G T C A C G T A C G T
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

PH0158.1_Rhox11_2/Jaspar

Match Rank:5
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---GCGCTGTGCAGCT-
AGGACGCTGTAAAGGGA
 A C G T A C G T A C G T A T C G A G T C A C T G A G T C A C G T A C T G A C G T A C T G A G T C C G T A A C T G A G T C A C G T A C G T
C G T A T C A G C A T G G T C A G A T C C T A G T A G C C A G T C T A G G A C T G C T A C G T A G C T A C T A G T A C G T C A G G C T A

PB0207.1_Zic3_2/Jaspar

Match Rank:6
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----GCGCTGTGCAGCT
NNTCCTGCTGTGNNN--
 A C G T A C G T A C G T A C G T A T C G A G T C A C T G A G T C A C G T A C T G A C G T A C T G A G T C C G T A A C T G A G T C A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C A C G T A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:7
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GCGCTGTGCAGCT-----
-NNNANTGCAGTGCNNTT
 A T C G A G T C A C T G A G T C A C G T A C T G A C G T A C T G A G T C C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.54
Offset:8
Orientation:forward strand
Alignment:GCGCTGTGCAGCT
--------CAGCC
 A T C G A G T C A C T G A G T C A C G T A C T G A C G T A C T G A G T C C G T A A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:9
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:GCGCTGTGCAGCT----
-------GCAGCTGTNN
 A T C G A G T C A C T G A G T C A C G T A C T G A C G T A C T G A G T C C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C T G G C A T

Myog/MA0500.1/Jaspar

Match Rank:10
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:GCGCTGTGCAGCT---
-----NNGCAGCTGTC
 A T C G A G T C A C T G A G T C A C G T A C T G A C G T A C T G A G T C C G T A A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C