Information for 3-SCGTGARGACCCC (Motif 4)

A T G C A G T C A T C G A C G T A C T G C G T A C T A G A C T G C G T A A G T C A G T C A G T C A G T C
Reverse Opposite:
A C T G A C T G A C T G A C T G A C G T A G T C A G T C A C G T A G T C C G T A A T G C A C T G A T C G
p-value:1e-10
log p-value:-2.531e+01
Information Content per bp:1.925
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.1 +/- 30.7bp
Average Position of motif in Background66.7 +/- 23.3bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:1
Score:0.71
Offset:5
Orientation:forward strand
Alignment:SCGTGARGACCCC--
-----AAGACCCYYN
 A T G C A G T C A T C G A C G T A C T G C G T A C T A G A C T G C G T A A G T C A G T C A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A T G C A A C T G G T C A A G T C A G T C A G T C A G T C A G C T T G A C

PB0025.1_Glis2_1/Jaspar

Match Rank:2
Score:0.64
Offset:3
Orientation:forward strand
Alignment:SCGTGARGACCCC------
---TATCGACCCCCCACAG
 A T G C A G T C A T C G A C G T A C T G C G T A C T A G A C T G C G T A A G T C A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A C T G C T A G C A T T A G C A C T G T G C A A G T C A G T C G A T C G A T C G A T C G A T C T G C A A G T C C T G A C A T G

PB0057.1_Rxra_1/Jaspar

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:SCGTGARGACCCC-----
-TGTCGTGACCCCTTAAT
 A T G C A G T C A T C G A C G T A C T G C G T A C T A G A C T G C G T A A G T C A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T C A G T A T C G G A C T A G T C C A T G A G C T T C A G G T C A G T A C G T A C A G T C A G T C C G A T G A C T T C G A G T C A A G C T

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:4
Score:0.58
Offset:2
Orientation:forward strand
Alignment:SCGTGARGACCCC------
--CATAAGACCACCATTAC
 A T G C A G T C A T C G A C G T A C T G C G T A C T A G A C T G C G T A A G T C A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G T C C G A T C A G T C T G A T G C A A C T G G T C A G A T C A T G C G T C A G A T C G A T C G C T A A C G T C A G T C T G A A G C T

PB0201.1_Zfp281_2/Jaspar

Match Rank:5
Score:0.57
Offset:3
Orientation:forward strand
Alignment:SCGTGARGACCCC-------
---AGGAGACCCCCAATTTG
 A T G C A G T C A T C G A C G T A C T G C G T A C T A G A C T G C G T A A G T C A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C A T G C A T G C G T A C A T G C T G A T G A C G T A C T A G C A G T C G T A C G C T A G C T A C G A T C G A T C G A T T C A G

PB0030.1_Hnf4a_1/Jaspar

Match Rank:6
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:SCGTGARGACCCC-----
-NNANTTGACCCCTNNNN
 A T G C A G T C A T C G A C G T A C T G C G T A C T A G A C T G C G T A A G T C A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G T A C C G T A T C G A A C G T A C G T C T A G G T C A G T A C G T A C A G T C A G T C C A G T A C T G T C A G G T C A T A C G

ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:SCGTGARGACCCC--
GGGCGATGACCAYTC
 A T G C A G T C A T C G A C G T A C T G C G T A C T A G A C T G C G T A A G T C A G T C A G T C A G T C A C G T A C G T
C T A G T A C G T C A G A G T C A C T G T G C A A G C T A C T G G T C A G T A C G A T C C T G A A G T C A C G T A T G C

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:8
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:SCGTGARGACCCC-
------TGACCYCT
 A T G C A G T C A T C G A C G T A C T G C G T A C T A G A C T G C G T A A G T C A G T C A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T

PB0118.1_Esrra_2/Jaspar

Match Rank:9
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:SCGTGARGACCCC-----
-NNNNTTGACCCCTNNNN
 A T G C A G T C A T C G A C G T A C T G C G T A C T A G A C T G C G T A A G T C A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T C A T G T A G C T A G C G A T C C G A T A G C T T C A G G C T A G T A C G A T C A G T C A G T C C G A T T G A C T A C G G T A C A T G C

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-SCGTGARGACCCC
TGCGTG--------
 A C G T A T G C A G T C A T C G A C G T A C T G C G T A C T A G A C T G C G T A A G T C A G T C A G T C A G T C
G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T