Information for 1-AKRAGATSAAAGS (Motif 2)

C T G A A C G T T C G A C G T A A T C G C G T A A C G T A T G C C G T A C G T A C G T A A C T G T A C G
Reverse Opposite:
A T G C A G T C A C G T A C G T A C G T A T C G C G T A A C G T A T G C A C G T A G C T G T C A A G C T
p-value:1e-13
log p-value:-3.039e+01
Information Content per bp:1.847
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.06%
Number of Background Sequences with motif10.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets36.5 +/- 14.9bp
Average Position of motif in Background51.9 +/- 24.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LEF1/MA0768.1/Jaspar

Match Rank:1
Score:0.85
Offset:1
Orientation:forward strand
Alignment:AKRAGATSAAAGS---
-AAAGATCAAAGGGTT
 C T G A A C G T T C G A C G T A A T C G C G T A A C G T A T G C C G T A C G T A C G T A A C T G T A C G A C G T A C G T A C G T
A C G T T C G A C T G A C T G A T A C G C G T A G C A T T A G C C G T A C T G A C T G A T C A G T C A G T C A G C G A T G C A T

TCF7L2/MA0523.1/Jaspar

Match Rank:2
Score:0.85
Offset:1
Orientation:forward strand
Alignment:AKRAGATSAAAGS--
-AAAGATCAAAGGAA
 C T G A A C G T T C G A C G T A A T C G C G T A A C G T A T G C C G T A C G T A C G T A A C T G T A C G A C G T A C G T
A C G T C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A

Tcf7/MA0769.1/Jaspar

Match Rank:3
Score:0.85
Offset:1
Orientation:forward strand
Alignment:AKRAGATSAAAGS
-AAAGATCAAAGG
 C T G A A C G T T C G A C G T A A T C G C G T A A C G T A T G C C G T A C G T A C G T A A C T G T A C G
A C G T C T G A C T G A C G T A A T C G C G T A A C G T A T G C C G T A T C G A C G T A C T A G T C A G

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:4
Score:0.84
Offset:3
Orientation:forward strand
Alignment:AKRAGATSAAAGS--
---ACATCAAAGGNA
 C T G A A C G T T C G A C G T A A T C G C G T A A C G T A T G C C G T A C G T A C G T A A C T G T A C G A C G T A C G T
A C G T A C G T A C G T C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A

PB0040.1_Lef1_1/Jaspar

Match Rank:5
Score:0.83
Offset:0
Orientation:reverse strand
Alignment:AKRAGATSAAAGS----
NANAGATCAAAGGGNNN
 C T G A A C G T T C G A C G T A A T C G C G T A A C G T A T G C C G T A C G T A C G T A A C T G T A C G A C G T A C G T A C G T A C G T
A C T G G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C A G G C T A G A C T G A C T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.81
Offset:3
Orientation:forward strand
Alignment:AKRAGATSAAAGS
---ACATCAAAGG
 C T G A A C G T T C G A C G T A A T C G C G T A A C G T A T G C C G T A C G T A C G T A A C T G T A C G
A C G T A C G T A C G T C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:7
Score:0.81
Offset:0
Orientation:reverse strand
Alignment:AKRAGATSAAAGS----
NNNAGATCAAAGGANNN
 C T G A A C G T T C G A C G T A A T C G C G T A A C G T A T G C C G T A C G T A C G T A A C T G T A C G A C G T A C G T A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T

PB0083.1_Tcf7_1/Jaspar

Match Rank:8
Score:0.79
Offset:0
Orientation:forward strand
Alignment:AKRAGATSAAAGS----
TATAGATCAAAGGAAAA
 C T G A A C G T T C G A C G T A A T C G C G T A A C G T A T G C C G T A C G T A C G T A A C T G T A C G A C G T A C G T A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C A T G C T A

PB0082.1_Tcf3_1/Jaspar

Match Rank:9
Score:0.79
Offset:0
Orientation:forward strand
Alignment:AKRAGATSAAAGS----
TATAGATCAAAGGAAAA
 C T G A A C G T T C G A C G T A A T C G C G T A A C G T A T G C C G T A C G T A C G T A A C T G T A C G A C G T A C G T A C G T A C G T
G A C T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G C T A G C T A G C T A

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:10
Score:0.78
Offset:3
Orientation:forward strand
Alignment:AKRAGATSAAAGS
---ACWTCAAAGG
 C T G A A C G T T C G A C G T A A T C G C G T A A C G T A T G C C G T A C G T A C G T A A C T G T A C G
A C G T A C G T A C G T C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G