Information for 6-CTCAGAAGGCAGTCCG (Motif 16)

A G T C A G C T A G T C C G T A A C T G C G T A G T C A A T C G A C T G A G T C C G T A A C T G C G A T A G T C A T G C A C T G
Reverse Opposite:
A G T C A T C G A C T G C G T A A G T C A C G T A C T G A G T C A T G C A C G T A C G T A G T C A C G T A C T G C T G A A C T G
p-value:1e-5
log p-value:-1.323e+01
Information Content per bp:1.911
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.32%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.8 +/- 26.3bp
Average Position of motif in Background18.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CTCAGAAGGCAGTCCG
CACAGCAGGGGG----
 A G T C A G C T A G T C C G T A A C T G C G T A G T C A A T C G A C T G A G T C C G T A A C T G C G A T A G T C A T G C A C T G
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:2
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CTCAGAAGGCAGTCCG
DCTCAGCAGG-------
 A C G T A G T C A G C T A G T C C G T A A C T G C G T A G T C A A T C G A C T G A G T C C G T A A C T G C G A T A G T C A T G C A C T G
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:3
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CTCAGAAGGCAGTCCG
DCHCAGCAGGRGGCC--
 A C G T A G T C A G C T A G T C C G T A A C T G C G T A G T C A A T C G A C T G A G T C C G T A A C T G C G A T A G T C A T G C A C T G
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:4
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---CTCAGAAGGCAGTCCG
CCACACAGCAGGAGA----
 A C G T A C G T A C G T A G T C A G C T A G T C C G T A A C T G C G T A G T C A A T C G A C T G A G T C C G T A A C T G C G A T A G T C A T G C A C T G
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T A C G T A C G T A C G T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:5
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----CTCAGAAGGCAGTCCG
ATTTCCCAGVAKSCY-----
 A C G T A C G T A C G T A C G T A G T C A G C T A G T C C G T A A C T G C G T A G T C A A T C G A C T G A G T C C G T A A C T G C G A T A G T C A T G C A C T G
T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C A C G T A C G T A C G T A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:6
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---CTCAGAAGGCAGTCCG
CCACACAGCAGGAGA----
 A C G T A C G T A C G T A G T C A G C T A G T C C G T A A C T G C G T A G T C A A T C G A C T G A G T C C G T A A C T G C G A T A G T C A T G C A C T G
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T A C G T A C G T A C G T

ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer

Match Rank:7
Score:0.53
Offset:3
Orientation:forward strand
Alignment:CTCAGAAGGCAGTCCG
---ANCAGGAAGT---
 A G T C A G C T A G T C C G T A A C T G C G T A G T C A A T C G A C T G A G T C C G T A A C T G C G A T A G T C A T G C A C T G
A C G T A C G T A C G T C G T A T G A C T A G C T G C A A C T G A C T G C G T A C G T A T C A G G A C T A C G T A C G T A C G T

ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer

Match Rank:8
Score:0.52
Offset:3
Orientation:forward strand
Alignment:CTCAGAAGGCAGTCCG
---ACVAGGAAGT---
 A G T C A G C T A G T C C G T A A C T G C G T A G T C A A T C G A C T G A G T C C G T A A C T G C G A T A G T C A T G C A C T G
A C G T A C G T A C G T G C T A A G T C T A C G T G C A A T C G T C A G G C T A T C G A T C A G A G C T A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:9
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---CTCAGAAGGCAGTCCG
GAGCACAGCAGGACA----
 A C G T A C G T A C G T A G T C A G C T A G T C C G T A A C T G C G T A G T C A A T C G A C T G A G T C C G T A A C T G C G A T A G T C A T G C A C T G
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A A C G T A C G T A C G T A C G T

ZIC1/MA0696.1/Jaspar

Match Rank:10
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:CTCAGAAGGCAGTCCG
CACAGCGGGGGGTC--
 A G T C A G C T A G T C C G T A A C T G C G T A G T C A A T C G A C T G A G T C C G T A A C T G C G A T A G T C A T G C A C T G
T G A C C T G A A G T C T G C A T C A G A G T C C T A G C A T G T C A G C A T G C A T G C A T G A G C T T G A C A C G T A C G T