Information for 1-CAGCGCCCTCCAGGCC (Motif 1)

A G T C C T G A A C T G A T G C A C T G A G T C A G T C A T G C A G C T A T G C G T A C G T C A A C T G T A C G T A G C A G T C
Reverse Opposite:
A C T G A C T G A T G C A G T C A C G T A C T G A T C G C T G A A T C G C T A G A C T G A G T C A T C G G T A C A G C T A C T G
p-value:1e-16
log p-value:-3.722e+01
Information Content per bp:1.824
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.06%
Number of Background Sequences with motif5.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets41.2 +/- 21.7bp
Average Position of motif in Background50.0 +/- 26.6bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:1
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CAGCGCCCTCCAGGCC
---TGCCCTGAGGGCA
A G T C C T G A A C T G A T G C A C T G A G T C A G T C A T G C A G C T A T G C G T A C G T C A A C T G T A C G T A G C A G T C
A C G T A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T A C T G T C G A T C A G A C T G A C T G A T G C C G T A

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:2
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CAGCGCCCTCCAGGCC
---TGCCCTNAGGGCA
A G T C C T G A A C T G A T G C A C T G A G T C A G T C A T G C A G C T A T G C G T A C G T C A A C T G T A C G T A G C A G T C
A C G T A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:3
Score:0.55
Offset:9
Orientation:reverse strand
Alignment:CAGCGCCCTCCAGGCC-
---------CTAGGCCT
A G T C C T G A A C T G A T G C A C T G A G T C A G T C A T G C A G C T A T G C G T A C G T C A A C T G T A C G T A G C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:4
Score:0.54
Offset:3
Orientation:forward strand
Alignment:CAGCGCCCTCCAGGCC
---TGCCCTGAGGGCA
A G T C C T G A A C T G A T G C A C T G A G T C A G T C A T G C A G C T A T G C G T A C G T C A A C T G T A C G T A G C A G T C
A C G T A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.53
Offset:9
Orientation:reverse strand
Alignment:CAGCGCCCTCCAGGCC-
---------CNAGGCCT
A G T C C T G A A C T G A T G C A C T G A G T C A G T C A T G C A G C T A T G C G T A C G T C A A C T G T A C G T A G C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:6
Score:0.50
Offset:7
Orientation:forward strand
Alignment:CAGCGCCCTCCAGGCC-
-------NTCAAGGTCA
A G T C C T G A A C T G A T G C A C T G A G T C A G T C A T G C A G C T A T G C G T A C G T C A A C T G T A C G T A G C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.50
Offset:-5
Orientation:forward strand
Alignment:-----CAGCGCCCTCCAGGCC
CNNBRGCGCCCCCTGSTGGC-
A C G T A C G T A C G T A C G T A C G T A G T C C T G A A C T G A T G C A C T G A G T C A G T C A T G C A G C T A T G C G T A C G T C A A C T G T A C G T A G C A G T C
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:8
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:CAGCGCCCTCCAGGCC
---NSCACTYVAV---
A G T C C T G A A C T G A T G C A C T G A G T C A G T C A T G C A G C T A T G C G T A C G T C A A C T G T A C G T A G C A G T C
A C G T A C G T A C G T C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:9
Score:0.49
Offset:10
Orientation:reverse strand
Alignment:CAGCGCCCTCCAGGCC--------
----------CAGGCCNNGGCCNN
A G T C C T G A A C T G A T G C A C T G A G T C A G T C A T G C A G C T A T G C G T A C G T C A A C T G T A C G T A G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

PB0052.1_Plagl1_1/Jaspar

Match Rank:10
Score:0.49
Offset:-4
Orientation:reverse strand
Alignment:----CAGCGCCCTCCAGGCC
NNNGGGGCGCCCCCNN----
A C G T A C G T A C G T A C G T A G T C C T G A A C T G A T G C A C T G A G T C A G T C A T G C A G C T A T G C G T A C G T C A A C T G T A C G T A G C A G T C
A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A A C G T A C G T A C G T A C G T