Information for 7-GAGACGCCCGGCC (Motif 9)

A T C G C G T A A C T G C T G A G T A C A C T G A G T C A G T C A G T C A T C G A C T G A G T C A G T C
Reverse Opposite:
A C T G A C T G A G T C A T G C A C T G A C T G A C T G G T A C A C T G A G C T A G T C A C G T A T G C
p-value:1e-10
log p-value:-2.470e+01
Information Content per bp:1.903
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif5.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets39.6 +/- 20.7bp
Average Position of motif in Background66.7 +/- 27.5bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sp1(Zf)/Promoter/Homer

Match Rank:1
Score:0.62
Offset:4
Orientation:forward strand
Alignment:GAGACGCCCGGCC---
----GGCCCCGCCCCC
 A T C G C G T A A C T G C T G A G T A C A C T G A G T C A G T C A G T C A T C G A C T G A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C

PB0164.1_Smad3_2/Jaspar

Match Rank:2
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GAGACGCCCGGCC------
--TACGCCCCGCCACTCTG
 A T C G C G T A A C T G C T G A G T A C A C T G A G T C A G T C A G T C A T C G A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

POL003.1_GC-box/Jaspar

Match Rank:3
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GAGACGCCCGGCC----
---NAGCCCCGCCCCCN
 A T C G C G T A A C T G C T G A G T A C A C T G A G T C A G T C A G T C A T C G A C T G A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GAGACGCCCGGCC--
-ACATGCCCGGGCAT
 A T C G C G T A A C T G C T G A G T A C A C T G A G T C A G T C A G T C A T C G A C T G A G T C A G T C A C G T A C G T
A C G T C T G A T A G C G C T A C G A T A T C G A G T C G A T C G A T C C T A G T C A G T C A G G T A C G C T A C A G T

SP2/MA0516.1/Jaspar

Match Rank:5
Score:0.58
Offset:5
Orientation:forward strand
Alignment:GAGACGCCCGGCC-------
-----GCCCCGCCCCCTCCC
 A T C G C G T A A C T G C T G A G T A C A C T G A G T C A G T C A G T C A T C G A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C

PB0143.1_Klf7_2/Jaspar

Match Rank:6
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GAGACGCCCGGCC-
AAGCATACGCCCAACTT
 A C G T A C G T A C G T A T C G C G T A A C T G C T G A G T A C A C T G A G T C A G T C A G T C A T C G A C T G A G T C A G T C A C G T
T G C A T C G A C T A G A G T C C G T A C G A T G T C A A G T C C T A G T A G C T A G C G A T C G T C A C G T A G T A C G C A T C A G T

SP1/MA0079.3/Jaspar

Match Rank:7
Score:0.57
Offset:5
Orientation:forward strand
Alignment:GAGACGCCCGGCC---
-----GCCCCGCCCCC
 A T C G C G T A A C T G C T G A G T A C A C T G A G T C A G T C A G T C A T C G A C T G A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G A G T C G A T C A G T C A G T C C A T G A G T C A G T C A G T C G A T C A G T C

KLF5/MA0599.1/Jaspar

Match Rank:8
Score:0.56
Offset:5
Orientation:forward strand
Alignment:GAGACGCCCGGCC--
-----GCCCCGCCCC
 A T C G C G T A A C T G C T G A G T A C A C T G A G T C A G T C A G T C A T C G A C T G A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C G T A C A G T C C T A G A G T C A G T C A G T C G A T C

GLIS2/MA0736.1/Jaspar

Match Rank:9
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GAGACGCCCGGCC---
--GACCCCCCGCGAAG
 A T C G C G T A A C T G C T G A G T A C A C T G A G T C A G T C A G T C A T C G A C T G A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C T G T C G A A G T C G T A C G A T C G T A C G T A C G A T C C T A G A G T C C T A G C T G A G T C A A T C G

Klf4/MA0039.2/Jaspar

Match Rank:10
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:GAGACGCCCGGCC--
-----GCCCCACCCA
 A T C G C G T A A C T G C T G A G T A C A C T G A G T C A G T C A G T C A T C G A C T G A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T G A C G A T C T G A C G T A C C T G A T A G C A G T C A G T C G C T A