Information for 5-TGCAGATSCYYCCAGR (Motif 7)

C G A T A C T G A T G C C G T A A C T G C T G A A C G T A T C G A G T C A G C T A G C T A G T C A G T C C G T A A C T G C T G A
Reverse Opposite:
A G C T A G T C A C G T A C T G A C T G C T G A C T A G A C T G A T G C C G T A A G C T A G T C A C G T A T C G G T A C C G T A
p-value:1e-11
log p-value:-2.641e+01
Information Content per bp:1.882
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.2 +/- 31.1bp
Average Position of motif in Background62.3 +/- 28.2bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:1
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TGCAGATSCYYCCAGR
AGATGCTRCTRCCHT-
 C G A T A C T G A T G C C G T A A C T G C T G A A C G T A T C G A G T C A G C T A G C T A G T C A G T C C G T A A C T G C T G A
C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T A C G T

HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TGCAGATSCYYCCAGR---
TTCTAGAANNTTCCAGAANN
 A C G T C G A T A C T G A T G C C G T A A C T G C T G A A C G T A T C G A G T C A G C T A G C T A G T C A G T C C G T A A C T G C T G A A C G T A C G T A C G T
A C G T A C G T T A G C A G C T T C G A C T A G G T C A C T G A A T C G T A G C G A C T C A G T A T G C A G T C C T G A A C T G T C G A T C G A A T C G T A C G

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:TGCAGATSCYYCCAGR
--CAGCTGTTTCCT--
 C G A T A C T G A T G C C G T A A C T G C T G A A C G T A T C G A G T C A G C T A G C T A G T C A G T C C G T A A C T G C T G A
A C G T A C G T G T A C C G T A C A T G T A G C A G C T A C T G A G C T G C A T A C G T A G T C A G T C A G C T A C G T A C G T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:4
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---TGCAGATSCYYCCAGR
AAGGCCAGATGGTCCGG--
 A C G T A C G T A C G T C G A T A C T G A T G C C G T A A C T G C T G A A C G T A T C G A G T C A G C T A G C T A G T C A G T C C G T A A C T G C T G A
G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G A C G T A C G T

HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer

Match Rank:5
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:TGCAGATSCYYCCAGR-
--TAGAANVTTCTAGAA
 C G A T A C T G A T G C C G T A A C T G C T G A A C G T A T C G A G T C A G C T A G C T A G T C A G T C C G T A A C T G C T G A A C G T
A C G T A C G T G A C T C T G A T C A G T G C A C G T A A T G C T A C G G A C T C A G T A G T C G A C T C T G A C A T G T C G A C T G A

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:6
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-TGCAGATSCYYCCAGR
SDGCAGGTGCNS-----
 A C G T C G A T A C T G A T G C C G T A A C T G C T G A A C G T A T C G A G T C A G C T A G C T A G T C A G T C C G T A A C T G C T G A
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C A C G T A C G T A C G T A C G T A C G T

ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TGCAGATSCYYCCAGR
TCCAGATGTT------
 C G A T A C T G A T G C C G T A A C T G C T G A A C G T A T C G A G T C A G C T A G C T A G T C A G T C C G T A A C T G C T G A
A C G T T G A C A G T C C G T A A T C G G T C A A C G T A T C G A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:8
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-TGCAGATSCYYCCAGR
ATGMATATDC-------
 A C G T C G A T A C T G A T G C C G T A A C T G C T G A A C G T A T C G A G T C A G C T A G C T A G T C A G T C C G T A A C T G C T G A
G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Myod1/MA0499.1/Jaspar

Match Rank:9
Score:0.52
Offset:0
Orientation:forward strand
Alignment:TGCAGATSCYYCCAGR
TGCAGCTGTCCCT---
 C G A T A C T G A T G C C G T A A C T G C T G A A C G T A T C G A G T C A G C T A G C T A G T C A G T C C G T A A C T G C T G A
G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T A C G T A C G T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:10
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:TGCAGATSCYYCCAGR
AGCAGCTGCT------
 C G A T A C T G A T G C C G T A A C T G C T G A A C G T A T C G A G T C A G C T A G C T A G T C A G T C C G T A A C T G C T G A
C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T