Information for 6-CAGCCGCCAGCAG (Motif 12)

T A G C C G T A A C T G A G T C A G T C A C T G A G T C A G T C C G T A A C T G A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G A G T C A C G T A C T G A C T G A G T C A C T G A C T G A G T C A C G T A C T G
p-value:1e-9
log p-value:-2.228e+01
Information Content per bp:1.954
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif4.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets35.0 +/- 13.5bp
Average Position of motif in Background67.1 +/- 25.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:1
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CAGCCGCCAGCAG---
-GGCCYCCTGCTGDGH
 T A G C C G T A A C T G A G T C A G T C A C T G A G T C A G T C C G T A A C T G A G T C C G T A A C T G A C G T A C G T A C G T
A C G T C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:2
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CAGCCGCCAGCAG-
ATTGCCTCAGGCAAT
 A C G T T A G C C G T A A C T G A G T C A G T C A C T G A G T C A G T C C G T A A C T G A G T C C G T A A C T G A C G T
C G T A C A G T G C A T T C A G G A T C G T A C A C G T A T G C G T C A C T A G C A T G G T A C C T G A G T C A G C A T

YY2/MA0748.1/Jaspar

Match Rank:3
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CAGCCGCCAGCAG
-GTCCGCCATTA-
 T A G C C G T A A C T G A G T C A G T C A C T G A G T C A G T C C G T A A C T G A G T C C G T A A C T G
A C G T C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:4
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CAGCCGCCAGCAG
-CGCCTCAGGCA-
 T A G C C G T A A C T G A G T C A G T C A C T G A G T C A G T C C G T A A C T G A G T C C G T A A C T G
A C G T G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A A C G T

THAP1/MA0597.1/Jaspar

Match Rank:5
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CAGCCGCCAGCAG
---CTGCCCGCA-
 T A G C C G T A A C T G A G T C A G T C A C T G A G T C A G T C C G T A A C T G A G T C C G T A A C T G
A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:6
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:CAGCCGCCAGCAG---
------CCAGCTGTTN
 T A G C C G T A A C T G A G T C A G T C A C T G A G T C A G T C C G T A A C T G A G T C C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:7
Score:0.56
Offset:7
Orientation:reverse strand
Alignment:CAGCCGCCAGCAG--
-------CAGCTGNT
 T A G C C G T A A C T G A G T C A G T C A C T G A G T C A G T C C G T A A C T G A G T C C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T

YY1(Zf)/Promoter/Homer

Match Rank:8
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CAGCCGCCAGCAG-
--GCCGCCATCTTG
 T A G C C G T A A C T G A G T C A G T C A C T G A G T C A G T C C G T A A C T G A G T C C G T A A C T G A C G T
A C G T A C G T C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G

NRL/MA0842.1/Jaspar

Match Rank:9
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:CAGCCGCCAGCAG---
-----GTCAGCANNTN
 T A G C C G T A A C T G A G T C A G T C A C T G A G T C A G T C C G T A A C T G A G T C C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.55
Offset:6
Orientation:forward strand
Alignment:CAGCCGCCAGCAG---
------NCAGCTGCTG
 T A G C C G T A A C T G A G T C A G T C A C T G A G T C A G T C C G T A A C T G A G T C C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G