p-value: | 1e-11 |
log p-value: | -2.617e+01 |
Information Content per bp: | 1.912 |
Number of Target Sequences with motif | 5.0 |
Percentage of Target Sequences with motif | 0.74% |
Number of Background Sequences with motif | 1.1 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 41.0 +/- 24.6bp |
Average Position of motif in Background | 29.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | 2.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Hoxd9/MA0913.1/Jaspar
Match Rank: | 1 |
Score: | 0.58 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | TAGAATTTTTCTTGCT -----TTTTTATTGC- |
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PH0064.1_Hoxb9/Jaspar
Match Rank: | 2 |
Score: | 0.57 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | TAGAATTTTTCTTGCT-- --NGANTTTTATGGCTCN |
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CDX2/MA0465.1/Jaspar
Match Rank: | 3 |
Score: | 0.57 |
Offset: | 6 |
Orientation: | reverse strand |
Alignment: | TAGAATTTTTCTTGCT- ------TTTTATGGCTN |
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PH0057.1_Hoxb13/Jaspar
Match Rank: | 4 |
Score: | 0.55 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | TAGAATTTTTCTTGCT-- --NNAATTTTATTGGNTN |
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HOXA10/MA0899.1/Jaspar
Match Rank: | 5 |
Score: | 0.55 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | TAGAATTTTTCTTGCT -----NTTTTATTACN |
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Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer
Match Rank: | 6 |
Score: | 0.54 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | TAGAATTTTTCTTGCT -----NTTTTATGAC- |
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PH0078.1_Hoxd13/Jaspar
Match Rank: | 7 |
Score: | 0.54 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | TAGAATTTTTCTTGCT-- --NNANTTTTATTGGNNN |
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PH0013.1_Cdx2/Jaspar
Match Rank: | 8 |
Score: | 0.53 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | TAGAATTTTTCTTGCT--- ---NAATTTTATTACCNNN |
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HOXD13/MA0909.1/Jaspar
Match Rank: | 9 |
Score: | 0.53 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | TAGAATTTTTCTTGCT -----NTTTTATTGG- |
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HOXA13/MA0650.1/Jaspar
Match Rank: | 10 |
Score: | 0.53 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | TAGAATTTTTCTTGCT -----TTTTTATTGG- |
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