Information for 3-GGTGCCCAGGCTGGAG (Motif 5)

A C T G T A C G C G A T A T C G T G A C A T G C A T G C C G T A C T A G C T A G A T G C A C G T A T C G A T C G C G T A C A T G
Reverse Opposite:
G A T C C G A T A T G C A T G C T C G A A T C G A G T C A G T C A C G T A T C G A T C G A C T G A T G C C G T A A G T C T G A C
p-value:1e-12
log p-value:-2.881e+01
Information Content per bp:1.708
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.04%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets37.3 +/- 24.5bp
Average Position of motif in Background52.3 +/- 34.2bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:GGTGCCCAGGCTGGAG
--TGCCCAGNHW----
 A C T G T A C G C G A T A T C G T G A C A T G C A T G C C G T A C T A G C T A G A T G C A C G T A T C G A T C G C G T A C A T G
A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T A C G T A C G T A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:2
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GGTGCCCAGGCTGGAG
GGGTGTGCCCAAAAGG---
 A C G T A C G T A C G T A C T G T A C G C G A T A T C G T G A C A T G C A T G C C G T A C T A G C T A G A T G C A C G T A T C G A T C G C G T A C A T G
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G A C G T A C G T A C G T

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GGTGCCCAGGCTGGAG
-ATGCCCGGGCATGT-
 A C T G T A C G C G A T A T C G T G A C A T G C A T G C C G T A C T A G C T A G A T G C A C G T A T C G A T C G C G T A C A T G
A C G T G T C A C G A T A C T G A G T C A G T C G A T C C T A G C T A G T C A G A T G C G C T A C G A T A T C G G A C T A C G T

PB0158.1_Rfx3_2/Jaspar

Match Rank:4
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------GGTGCCCAGGCTGGAG-
NNTNGNNGTAACCAAGNNNNAGN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G T A C G C G A T A T C G T G A C A T G C A T G C C G T A C T A G C T A G A T G C A C G T A T C G A T C G C G T A C A T G A C G T
T A G C G C A T A G C T A G C T A C T G A G C T A C T G C A T G G A C T G T C A G C T A T A G C A G T C C G T A C G T A T A C G A T C G T A C G C G A T T A G C T G C A C T A G A C G T

HIC2/MA0738.1/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GGTGCCCAGGCTGGAG
-ATGCCCACC------
 A C T G T A C G C G A T A T C G T G A C A T G C A T G C C G T A C T A G C T A G A T G C A C G T A T C G A T C G C G T A C A T G
A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:GGTGCCCAGGCTGGAG
-----CCAGACAG---
 A C T G T A C G C G A T A T C G T G A C A T G C A T G C C G T A C T A G C T A G A T G C A C G T A T C G A T C G C G T A C A T G
A C G T A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T

GLI2/MA0734.1/Jaspar

Match Rank:7
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GGTGCCCAGGCTGGAG
-GCGACCACACTG---
 A C T G T A C G C G A T A T C G T G A C A T G C A T G C C G T A C T A G C T A G A T G C A C G T A T C G A T C G C G T A C A T G
A C G T C T A G T G A C C A T G T G C A A G T C A T G C G T C A A T G C T G C A G T A C C G A T C T A G A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:GGTGCCCAGGCTGGAG
-----CCAGACRSVB-
 A C T G T A C G C G A T A T C G T G A C A T G C A T G C C G T A C T A G C T A G A T G C A C G T A T C G A T C G C G T A C A T G
A C G T A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:9
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--GGTGCCCAGGCTGGAG
NNNNTGACCCGGCGCG--
 A C G T A C G T A C T G T A C G C G A T A T C G T G A C A T G C A T G C C G T A C T A G C T A G A T G C A C G T A T C G A T C G C G T A C A T G
C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G A C G T A C G T

NRF1/MA0506.1/Jaspar

Match Rank:10
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:GGTGCCCAGGCTGGAG
--TGCGCAGGCGC---
 A C T G T A C G C G A T A T C G T G A C A T G C A T G C C G T A C T A G C T A G A T G C A C G T A T C G A T C G C G T A C A T G
A C G T A C G T A G C T A C T G A T G C C T A G A G T C T G C A A C T G T A C G A G T C A C T G A G T C A C G T A C G T A C G T