Information for 13-TTTGAAAGTC (Motif 23)

C A G T A C G T C G A T C A T G C G T A G T C A C G T A C A T G A G C T A G T C
Reverse Opposite:
A C T G C T G A G T A C A C G T A C G T A C G T G T A C C G T A T G C A G T C A
p-value:1e-9
log p-value:-2.219e+01
Information Content per bp:1.841
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.82%
Number of Background Sequences with motif206.6
Percentage of Background Sequences with motif0.43%
Average Position of motif in Targets50.5 +/- 27.6bp
Average Position of motif in Background48.9 +/- 28.2bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:TTTGAAAGTC
TTTGAAACCG
 C A G T A C G T C G A T C A T G C G T A G T C A C G T A C A T G A G C T A G T C
A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

PB0134.1_Hnf4a_2/Jaspar

Match Rank:2
Score:0.70
Offset:0
Orientation:forward strand
Alignment:TTTGAAAGTC------
GGCAAAAGTCCAATAA
 C A G T A C G T C G A T C A T G C G T A G T C A C G T A C A T G A G C T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T

Nr2e1/MA0676.1/Jaspar

Match Rank:3
Score:0.67
Offset:3
Orientation:forward strand
Alignment:TTTGAAAGTC--
---AAAAGTCAA
 C A G T A C G T C G A T C A T G C G T A G T C A C G T A C A T G A G C T A G T C A C G T A C G T
A C G T A C G T A C G T G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A

PB0136.1_IRC900814_2/Jaspar

Match Rank:4
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TTTGAAAGTC------
ATGGAAAGTCGTAAAA
 C A G T A C G T C G A T C A T G C G T A G T C A C G T A C A T G A G C T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C T G A A G C T A C T G C T A G C T G A T C G A G T C A A C T G G A C T A G T C C A T G A C G T C T G A C G T A T C G A G C T A

TATA-Box(TBP)/Promoter/Homer

Match Rank:5
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TTTGAAAGTC
CCTTTTATAGNC
 A C G T A C G T C A G T A C G T C G A T C A T G C G T A G T C A C G T A C A T G A G C T A G T C
A T G C G A T C G A C T A G C T C G A T C G A T G T C A C G A T T C G A A T C G T A G C T A G C

Esrra/MA0592.2/Jaspar

Match Rank:6
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TTTGAAAGTC--
-TTCAAGGTCAT
 C A G T A C G T C G A T C A T G C G T A G T C A C G T A C A T G A G C T A G T C A C G T A C G T
A C G T A C G T G A C T T A G C C T G A C T G A A C T G A C T G A C G T A T G C T C G A G C A T

LIN54/MA0619.1/Jaspar

Match Rank:7
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TTTGAAAGTC
ATTTGAATT--
 A C G T C A G T A C G T C G A T C A T G C G T A G T C A C G T A C A T G A G C T A G T C
C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T A C G T A C G T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TTTGAAAGTC
GAAAGTGAAAGT-
 A C G T A C G T A C G T C A G T A C G T C G A T C A T G C G T A G T C A C G T A C A T G A G C T A G T C
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:9
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TTTGAAAGTC--
--TCAAGGTCAT
 C A G T A C G T C G A T C A T G C G T A G T C A C G T A C A T G A G C T A G T C A C G T A C G T
A C G T A C G T G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T

MEIS2/MA0774.1/Jaspar

Match Rank:10
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TTTGAAAGTC
-TTGACAGC-
 C A G T A C G T C G A T C A T G C G T A G T C A C G T A C A T G A G C T A G T C
A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T